RNA–Protein interactions for RNA: ENST00000557750.1

RCCD1-209, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 1,696 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-209ENST00000557750 CLCN6P51797 869 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 SLC20A2Q08357 652 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 DLG2Q15700 870 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 HNRNPA1L2Q32P51 320 aaKnown RBP12.47□□□□□ -0.41
RCCD1-209ENST00000557750 CCDC181Q5TID7 509 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 KIAA1211LQ6NV74 962 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 CEP68Q76N32 757 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 SLC35F6Q8N357 371 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 FAM160A2Q8N612 972 aaPredicted RBP12.47□□□□□ -0.41
RCCD1-209ENST00000557750 DTLQ9NZJ0 730 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 UBA2Q9UBT2 640 aaPredicted RBP12.47□□□□□ -0.41
RCCD1-209ENST00000557750 SUN2Q9UH99 717 aa12.47□□□□□ -0.41
RCCD1-209ENST00000557750 FCF1Q9Y324 198 aaKnown RBP12.47□□□□□ -0.41
RCCD1-209ENST00000557750 EDDM13A0A1B0GTR0 161 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 KCNK3O14649 394 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 ENC1O14682 589 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 SMAD6O43541 496 aaKnown RBP12.46□□□□□ -0.41
RCCD1-209ENST00000557750 ATP9BO43861 1147 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 PRAMEF11O60813 436 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 VAV1P15498 845 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 MX2P20592 715 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 VASPP50552 380 aaPredicted RBP12.46□□□□□ -0.41
RCCD1-209ENST00000557750 ADCY2Q08462 1091 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 GALNT2Q10471 571 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 SLC10A2Q12908 348 aaPredicted RBP12.46□□□□□ -0.41
RCCD1-209ENST00000557750 SEL1L2Q5TEA6 688 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 DCAF12L1Q5VU92 463 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 ANO7Q6IWH7 933 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 NPNTQ6UXI9 565 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 Q6ZVU0 165 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 C17orf53Q8N3J3 647 aaPredicted RBP12.46□□□□□ -0.41
RCCD1-209ENST00000557750 HAUS1Q96CS2 278 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 BCCIPQ9P287 314 aaKnown RBP eCLIP12.46□□□□□ -0.41
RCCD1-209ENST00000557750 JRKLQ9Y4A0 524 aa12.46□□□□□ -0.41
RCCD1-209ENST00000557750 FRYQ5TBA9 3013 aa12.46□□□□□ -0.42
RCCD1-209ENST00000557750 RALGAPA1Q6GYQ0 2036 aa12.46□□□□□ -0.42
RCCD1-209ENST00000557750 CXorf51AA0A1B0GTR3 108 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 AXIN1O15169 862 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 FOXD2O60548 495 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 SIN3BO75182 1162 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 ALDH1A2O94788 518 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 TMCC1O94876 653 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 TJP3O95049 919 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 APBB3O95704 486 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CD160O95971 181 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 TGM2P21980 687 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 HOXA6P31267 233 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PTPN7P35236 360 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 GARSP41250 739 aaKnown RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PXNP49023 591 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 GNG11P61952 73 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 IL10RBQ08334 325 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 SF3A2Q15428 464 aaKnown RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 C22orf39Q6P5X5 142 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 METTL3Q86U44 580 aaKnown RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 WDR5BQ86VZ2 330 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CACUL1Q86Y37 369 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 LRRC49Q8IUZ0 686 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PGBD3Q8N328 593 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CCNYQ8ND76 341 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 FRS2Q8WU20 508 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 NSMCE1Q8WV22 266 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 HMGB4Q8WW32 186 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 P3H4Q92791 437 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 TLR10Q9BXR5 811 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 TM6SF2Q9BZW4 377 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CEP44Q9C0F1 390 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 TNKS2Q9H2K2 1166 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PDFQ9HBH1 243 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PRSS16Q9NQE7 514 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 SAE1Q9UBE0 346 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 EFR3BQ9Y2G0 817 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 TARSL2A2RTX5 802 aaKnown RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 MAFKO60675 156 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PECAM1P16284 738 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 RECQLP46063 649 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 NR2C2P49116 596 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CAMK2GQ13555 558 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CCDC6Q16204 474 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 INO80DQ53TQ3 878 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 C9orf64Q5T6V5 341 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 N4BP2L1Q5TBK1 243 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 BBS12Q6ZW61 710 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 BZW1Q7L1Q6 419 aaKnown RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 RYBPQ8N488 228 aaPredicted RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CAMKK1Q8N5S9 505 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PCDH20Q8N6Y1 951 aaKnown RBP12.45□□□□□ -0.42
RCCD1-209ENST00000557750 OR2T3Q8NH03 318 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 LRRN4Q8WUT4 740 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CASKIN2Q8WXE0 1202 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PTPRN2Q92932 1015 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CCDC114Q96M63 670 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 HERPUD2Q9BSE4 406 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 CARD9Q9H257 536 aa12.45□□□□□ -0.42
RCCD1-209ENST00000557750 PPP1R12AO14974 1030 aaPredicted RBP12.44□□□□□ -0.42
RCCD1-209ENST00000557750 CXCR5P32302 372 aa12.44□□□□□ -0.42
RCCD1-209ENST00000557750 RHOAP61586 193 aa12.44□□□□□ -0.42
RCCD1-209ENST00000557750 ELAVL3Q14576 367 aaKnown RBP12.44□□□□□ -0.42
RCCD1-209ENST00000557750 RFTN1Q14699 578 aaPredicted RBP12.44□□□□□ -0.42
RCCD1-209ENST00000557750 PDK1Q15118 436 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms