RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 QKIQ96PU8 341 aaKnown RBP eCLIP14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 TUBGCP5Q96RT8 1024 aa14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 WDR24Q96S15 920 aa14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 ACOX2Q99424 681 aa14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 CINPQ9BW66 212 aaPredicted RBP14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 OSBPL1AQ9BXW6 950 aa14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 CPEB1Q9BZB8 566 aaKnown RBP14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 IRF2BPLQ9H1B7 796 aa14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 RSPH9Q9H1X1 276 aaPredicted RBP14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 CD248Q9HCU0 757 aa14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 PRSS16Q9NQE7 514 aa14.35□□□□□ -0.11
SUPT16H-208ENST00000557652 A0A1W2PQ67 120 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 BCLAF3A2AJT9 711 aaKnown RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 TTC34A8MYJ7 566 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 C1QTNF3-AMACRE9PGA6 284 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 J3KR12 359 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 PGRMC1O00264 195 aaKnown RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 NEBLO76041 1014 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 PEX11BO96011 259 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 ADH1BP00325 375 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 FGGP02679 453 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 RBP3P10745 1247 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 CCNB1P14635 433 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 CASQ1P31415 396 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 STIP1P31948 543 aaKnown RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 RHOAP61586 193 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 AP1S1P61966 158 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 OTUD4Q01804 1114 aaKnown RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 ADCY2Q08462 1091 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 TUBB2AQ13885 445 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 CCNG2Q16589 344 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 C9orf64Q5T6V5 341 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 ZNF776Q68DI1 518 aaPredicted RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 HEATR6Q6AI08 1181 aaKnown RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 LINGO4Q6UY18 593 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 RASSF3Q86WH2 238 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 SLC35B2Q8TB61 432 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 HCAR2Q8TDS4 363 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 NKD2Q969F2 451 aaPredicted RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 IL12RB2Q99665 862 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 MGME1Q9BQP7 344 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 TUBB2BQ9BVA1 445 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 POLR1EQ9GZS1 481 aaKnown RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 TRHDEQ9UKU6 1024 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 EML5Q05BV3 1969 aa14.34□□□□□ -0.11
SUPT16H-208ENST00000557652 GOLGA6L10A0A0M3HER8 536 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 H7C0C1 242 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 SMAD6O43541 496 aaKnown RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 GALR2O43603 387 aaPredicted RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 SIN3BO75182 1162 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 ZNF217O75362 1048 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 ZNF821O75541 412 aaPredicted RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 PECAM1P16284 738 aaPredicted RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 ATP5OP48047 213 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 SUOXP51687 545 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 EIF3EP60228 445 aaKnown RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 LMNB2Q03252 620 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 AP1B1Q10567 949 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 CYTH1Q15438 398 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 LONRF2Q1L5Z9 754 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 TTC31Q49AM3 519 aaPredicted RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 PKN3Q6P5Z2 889 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 TMEM92Q6UXU6 159 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 KBTBD6Q86V97 674 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 C11orf74Q86VG3 221 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 OR2A12Q8NGT7 310 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 HTR3CQ8WXA8 447 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 SPOCK2Q92563 424 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 PPP1R16AQ96I34 528 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 LGMNQ99538 433 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 HEPHQ9BQS7 1158 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 LHX3Q9UBR4 397 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 FEZ2Q9UHY8 353 aaPredicted RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 DRG1Q9Y295 367 aaKnown RBP14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 CEP192Q8TEP8 1941 aa14.33□□□□□ -0.12
SUPT16H-208ENST00000557652 HLA-EP13747 358 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 C5AR1P21730 350 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 CA4P22748 312 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 NFKBIAP25963 317 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 CHRNA3P32297 505 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 CNR2P34972 360 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 SATB1Q01826 763 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 SLC10A7Q0GE19 358 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 TEX44Q53QW1 395 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 AADACL2Q6P093 401 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 NPNTQ6UXI9 565 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 C4orf22Q6V702 233 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 ARHGAP36Q6ZRI8 547 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 Q6ZVU0 165 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 USP30Q70CQ3 517 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 TMPRSS6Q8IU80 811 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 TP53INP2Q8IXH6 220 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 PRCCQ92733 491 aaPredicted RBP14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 ZNF641Q96N77 438 aaPredicted RBP14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 NUDCD1Q96RS6 583 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 HERPUD2Q9BSE4 406 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 LRFN3Q9BTN0 628 aa14.32□□□□□ -0.12
SUPT16H-208ENST00000557652 HECAQ9UBI9 543 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms