RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 DPCR1Q3MIW9 517 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 DCAF4L1Q3SXM0 396 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 SPDYE7PQ495Y7 208 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 ATF7IP2Q5U623 682 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 DRICH1Q6PGQ1 229 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 DCLRE1AQ6PJP8 1040 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 KRBA2Q6ZNG9 492 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 MTSS1LQ765P7 747 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 ADSSL1Q8N142 457 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 ELMOD1Q8N336 334 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 C17orf53Q8N3J3 647 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 CMASQ8NFW8 434 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 SPATA20Q8TB22 786 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 MDM1Q8TC05 714 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 UBXN4Q92575 508 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 KIFAP3Q92845 792 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 MCRS1Q96EZ8 462 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 PPP1R13BQ96KQ4 1090 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 ACAP3Q96P50 834 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 GSDMAQ96QA5 445 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 MTMR9Q96QG7 549 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 PANX2Q96RD6 677 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 TEX101Q9BY14 249 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 NFKBIZQ9BYH8 718 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 XPO4Q9C0E2 1151 aaKnown RBP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 FZD8Q9H461 694 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 PDZD7Q9H5P4 517 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 TBC1D17Q9HA65 648 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 TOPORSQ9NS56 1045 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 MARCH5Q9NX47 278 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 SYBUQ9NX95 663 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 ZDHHC7Q9NXF8 308 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 IFNKQ9P0W0 207 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 MYO1AQ9UBC5 1043 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 CACNG4Q9UBN1 327 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 WNT16Q9UBV4 365 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 DUSP12Q9UNI6 340 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 SRPRBQ9Y5M8 271 aaKnown RBP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 ZFP37Q9Y6Q3 630 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF638Q14966 1978 aaKnown RBP4.21□□□□□ -1.74
ATXN3-240ENST00000556339 SPTBN2O15020 2390 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 GON4LQ3T8J9 2241 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 TCHHQ07283 1943 aa4.21□□□□□ -1.74
ATXN3-240ENST00000556339 CFAP54Q96N23 3096 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF891A8MT65 544 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF197O14709 1029 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 NCAM2O15394 837 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ERBB2P04626 1255 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 KRT18P05783 430 aaKnown RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 MYL1P05976 194 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 HNRNPA1P09651 372 aaKnown RBP eCLIP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ZNF18P17022 549 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 TYRP1P17643 537 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PTPN2P17706 415 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 AOC1P19801 751 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 MUTP22033 750 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 MCM3P25205 808 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PPP1R2P41236 205 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PEX3P56589 373 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 GPC5P78333 572 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 NTHL1P78549 312 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 CBX1P83916 185 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 OCRLQ01968 901 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 CEBPZQ03701 1054 aaKnown RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 DMP1Q13316 513 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ORC2Q13416 577 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 MORC3Q14149 939 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PDIA5Q14554 519 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 BRD3Q15059 726 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 TERF2Q15554 542 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 FAM187BQ17R55 369 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 FILIP1LQ4L180 1135 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 PABPC1LQ4VXU2 614 aaKnown RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 SLC44A4Q53GD3 710 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 GLRA4Q5JXX5 417 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 CYP4A22Q5TCH4 519 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ANKS6Q68DC2 871 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 SPECC1LQ69YQ0 1117 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ARMCX5Q6P1M9 558 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 TMCO3Q6UWJ1 677 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ASCL5Q7RTU5 278 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 GPRIN1Q7Z2K8 1008 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 GLCCI1Q86VQ1 547 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 SYT12Q8IV01 421 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 YAF2Q8IY57 180 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 GPR65Q8IYL9 337 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 SIMC1Q8NDZ2 872 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 MNS1Q8NEH6 495 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 APPL2Q8NEU8 664 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ANKRD20A12PQ8NF67 263 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 RASSF8Q8NHQ8 419 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ZFP28Q8NHY6 868 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 LNX1Q8TBB1 728 aaPredicted RBP4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ATRIPQ8WXE1 791 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ASB10Q8WXI3 467 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 ING5Q8WYH8 240 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 LINC00476Q8WZB0 136 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 SLC9A6Q92581 669 aa4.2□□□□□ -1.74
ATXN3-240ENST00000556339 SMARCE1Q969G3 411 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms