RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 PPP6R3Q5H9R7 873 aaPredicted RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 KCNT1Q5JUK3 1230 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3GQ6DHY5 549 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TXNRD3NBQ6F5E7 133 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3CQ6IPX1 549 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 PSAPL1Q6NUJ1 521 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 RFX8Q6ZV50 586 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 PSTKQ8IV42 348 aaKnown RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 TBC1D3Q8IZP1 549 aaPredicted RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 OR6K2Q8NGY2 324 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 CELF6Q96J87 481 aaKnown RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 SLC6A18Q96N87 628 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 EIF3CQ99613 913 aaKnown RBP20.88■□□□□ 0.93
VTI1B-205ENST00000555543 LRRC19Q9H756 370 aa20.88■□□□□ 0.93
VTI1B-205ENST00000555543 WNT9AO14904 365 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 LATO43561 262 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 BUB1O43683 1085 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 OPHN1O60890 802 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 TMCC1O94876 653 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 GKP32189 559 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 GRIA4P48058 902 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 NOVA1P51513 510 aaKnown RBP20.87■□□□□ 0.93
VTI1B-205ENST00000555543 ADKP55263 362 aaKnown RBP20.87■□□□□ 0.93
VTI1B-205ENST00000555543 MAPK8IP2Q13387 824 aaPredicted RBP20.87■□□□□ 0.93
VTI1B-205ENST00000555543 ACAP1Q15027 740 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 SLC18A3Q16572 532 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 ATXN7L2Q5T6C5 722 aaPredicted RBP20.87■□□□□ 0.93
VTI1B-205ENST00000555543 NPWQ8N729 165 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 NIPA2Q8N8Q9 360 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 HEPHQ9BQS7 1158 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 ZDHHC5Q9C0B5 715 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 KDM4CQ9H3R0 1056 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 ZDHHC6Q9H6R6 413 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 ZWILCHQ9H900 591 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 CWC15Q9P013 229 aaKnown RBP20.87■□□□□ 0.93
VTI1B-205ENST00000555543 HECAQ9UBI9 543 aaPredicted RBP20.87■□□□□ 0.93
VTI1B-205ENST00000555543 KNL1Q8NG31 2342 aa20.87■□□□□ 0.93
VTI1B-205ENST00000555543 SSU72P8A0A1W2PR75 194 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 ZSCAN5CA6NGD5 496 aaPredicted RBP20.86■□□□□ 0.93
VTI1B-205ENST00000555543 CD59P13987 128 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 ERCC2P18074 760 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 MAT2AP31153 395 aaKnown RBP20.86■□□□□ 0.93
VTI1B-205ENST00000555543 RACK1P63244 317 aaKnown RBP20.86■□□□□ 0.93
VTI1B-205ENST00000555543 SLC25A11Q02978 314 aaKnown RBP20.86■□□□□ 0.93
VTI1B-205ENST00000555543 DPYSQ14117 519 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 PIGHQ14442 188 aaPredicted RBP20.86■□□□□ 0.93
VTI1B-205ENST00000555543 KIF19Q2TAC6 998 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 SARM1Q6SZW1 724 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 PIP4P1Q86T03 277 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 CPNE8Q86YQ8 564 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 ARHGAP12Q8IWW6 846 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 DEFB124Q8NES8 71 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 OR2AP1Q8NGE2 309 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 ZNF564Q8TBZ8 553 aaPredicted RBP20.86■□□□□ 0.93
VTI1B-205ENST00000555543 CHP1Q99653 195 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 NCAPGQ9BPX3 1015 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 IP6K2Q9UHH9 426 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 FNDC3AQ9Y2H6 1198 aaKnown RBP20.86■□□□□ 0.93
VTI1B-205ENST00000555543 MFHAS1Q9Y4C4 1052 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 SNX11Q9Y5W9 270 aa20.86■□□□□ 0.93
VTI1B-205ENST00000555543 GSRP00390 522 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 WNT1P04628 370 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 CSRP1P21291 193 aaKnown RBP20.85■□□□□ 0.93
VTI1B-205ENST00000555543 NDST2P52849 883 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 TBX2Q13207 712 aaPredicted RBP20.85■□□□□ 0.93
VTI1B-205ENST00000555543 DPYSL2Q16555 572 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 HLA-BQ31612 363 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 AFMIDQ63HM1 303 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 ERN2Q76MJ5 926 aaKnown RBP20.85■□□□□ 0.93
VTI1B-205ENST00000555543 TRIM69Q86WT6 500 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 PLPP6Q8IY26 295 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 HSPH1Q92598 858 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 HDAC8Q9BY41 377 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 SLC39A8Q9C0K1 460 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 DEF6Q9H4E7 631 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 GAREM1Q9H706 876 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 PDFQ9HBH1 243 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 DYRK4Q9NR20 520 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 STAU2Q9NUL3 570 aaKnown RBP eCLIP20.85■□□□□ 0.93
VTI1B-205ENST00000555543 ANKRD6Q9Y2G4 727 aa20.85■□□□□ 0.93
VTI1B-205ENST00000555543 TMEM131Q92545 1883 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 J3KR12 359 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 DAPK3O43293 454 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 ADRB1P08588 477 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 TPM1P09493 284 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 RARAP10276 462 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 ITGB7P26010 798 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 TEAD4Q15561 434 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 N4BP2L1Q5TBK1 243 aaPredicted RBP20.84■□□□□ 0.93
VTI1B-205ENST00000555543 PARS2Q7L3T8 475 aaKnown RBP20.84■□□□□ 0.93
VTI1B-205ENST00000555543 TP53INP2Q8IXH6 220 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 RYBPQ8N488 228 aaPredicted RBP20.84■□□□□ 0.93
VTI1B-205ENST00000555543 PPP1R16AQ96I34 528 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 SERAC1Q96JX3 654 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 PREBQ9HCU5 417 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 SPTLC3Q9NUV7 552 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 ZNHIT6Q9NWK9 470 aaKnown RBP20.84■□□□□ 0.93
VTI1B-205ENST00000555543 LHX3Q9UBR4 397 aa20.84■□□□□ 0.93
VTI1B-205ENST00000555543 TP53BP1Q12888 1972 aaPredicted RBP20.83■□□□□ 0.93
VTI1B-205ENST00000555543 DOCK9Q9BZ29 2069 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms