RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 C1orf210Q8IVY1 113 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 BBS5Q8N3I7 341 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 CNTD1Q8N815 330 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF366Q8N895 744 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 DTWD2Q8NBA8 298 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 TSEN2Q8NCE0 465 aaKnown RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 OR2AP1Q8NGE2 309 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 OR2T3Q8NH03 318 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 LRRN4Q8WUT4 740 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 NKD2Q969F2 451 aaPredicted RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF419Q96HQ0 510 aaPredicted RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 LRIG1Q96JA1 1093 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 C16orf45Q96MC5 204 aaPredicted RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 QKIQ96PU8 341 aaKnown RBP eCLIP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 FAM129BQ96TA1 746 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 VAT1Q99536 393 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 MGME1Q9BQP7 344 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 USP29Q9HBJ7 922 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 LHX3Q9UBR4 397 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 DRG1Q9Y295 367 aaKnown RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 R3HDM2Q9Y2K5 976 aaKnown RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 MUC22E2RYF6 1773 aaPredicted RBP12.89□□□□□ -0.35
SYNE2-219ENST00000555323 ATG2BQ96BY7 2078 aa12.89□□□□□ -0.35
SYNE2-219ENST00000555323 K7ESF4 209 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 KCNK1O00180 336 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 PGRMC1O00264 195 aaKnown RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 MUSKO15146 869 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 LIASO43766 372 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 POP4O95707 220 aaKnown RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 JCHAINP01591 159 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 VAV1P15498 845 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 CES1P23141 567 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 DEKP35659 375 aaKnown RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 MMP13P45452 471 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 COPAP53621 1224 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 SATB1Q01826 763 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 WASHC5Q12768 1159 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 OASLQ15646 514 aaKnown RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 CYP1B1Q16678 543 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 MYLK3Q32MK0 819 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 RALGPS1Q5JS13 557 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 DPY19L3Q6ZPD9 716 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 Q6ZVU0 165 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 RASSF3Q86WH2 238 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 PGBD5Q8N414 524 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 TMIEQ8NEW7 156 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 HTR3CQ8WXA8 447 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 CCDC114Q96M63 670 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 CPEB1Q9BZB8 566 aaKnown RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 RSPH9Q9H1X1 276 aaPredicted RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 MTG2Q9H4K7 406 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 POLMQ9NP87 494 aaPredicted RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 PRMT8Q9NR22 394 aaPredicted RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 POLR3BQ9NW08 1133 aaPredicted RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 RBM22Q9NW64 420 aaKnown RBP eCLIP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 EBF1Q9UH73 591 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 DNPEPQ9ULA0 475 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 PPM1HQ9ULR3 514 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 ATP8A1Q9Y2Q0 1164 aa12.88□□□□□ -0.35
SYNE2-219ENST00000555323 NYNRINQ9P2P1 1898 aaKnown RBP12.88□□□□□ -0.35
SYNE2-219ENST00000555323 CCDC163A0A0D9SF12 145 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 FAM86C2PA6NEL3 165 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 H7C0C1 242 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 DLL1O00548 723 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 ITGAVP06756 1048 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 PTPN3P26045 913 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 RBL1P28749 1068 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 RECQLP46063 649 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 ATP5OP48047 213 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 RHOAP61586 193 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 ZBTB16Q05516 673 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 ZBTB17Q13105 803 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 BYSLQ13895 437 aaKnown RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 HEATR6Q6AI08 1181 aaKnown RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 ADAT2Q7Z6V5 191 aaKnown RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 TMPRSS6Q8IU80 811 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 CDKL3Q8IVW4 592 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 MAML2Q8IZL2 1156 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 STK40Q8N2I9 435 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 PRELID2Q8N945 189 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 OR8D1Q8WZ84 308 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 MRGPRX1Q96LB2 322 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 TEKT5Q96M29 485 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 GDAP1L1Q96MZ0 367 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 NUDCD1Q96RS6 583 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 FERMT1Q9BQL6 677 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 HEPHQ9BQS7 1158 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 CINPQ9BW66 212 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 MKRN2Q9H000 416 aaKnown RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 TNKS2Q9H2K2 1166 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 HAUS2Q9NVX0 235 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 SPATA6Q9NWH7 488 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 HECAQ9UBI9 543 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 FBXO4Q9UKT5 387 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 TRHDEQ9UKU6 1024 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 SCML1Q9UN30 329 aa12.87□□□□□ -0.35
SYNE2-219ENST00000555323 FARP1Q9Y4F1 1045 aaPredicted RBP12.87□□□□□ -0.35
SYNE2-219ENST00000555323 CFAP69A5D8W1 941 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 C5orf60A6NFR6 353 aa12.86□□□□□ -0.35
SYNE2-219ENST00000555323 ZNF500O60304 480 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms