RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 GDAP1L1Q96MZ0 367 aa14.52□□□□□ -0.09
CHD8-208ENST00000555301 PRSS16Q9NQE7 514 aa14.52□□□□□ -0.09
CHD8-208ENST00000555301 RBM22Q9NW64 420 aaKnown RBP eCLIP14.52□□□□□ -0.09
CHD8-208ENST00000555301 DOCK4Q8N1I0 1966 aa14.52□□□□□ -0.09
CHD8-208ENST00000555301 NCOR1O75376 2440 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 BCLAF3A2AJT9 711 aaKnown RBP14.51□□□□□ -0.09
CHD8-208ENST00000555301 KCNK1O00180 336 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 DLL1O00548 723 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 ZNF185O15231 689 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 LAMTOR5O43504 91 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 BNIP3LO60238 219 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 COL9A1P20849 921 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 MAPK8P45983 427 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 RAD51Q06609 339 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 CCNG2Q16589 344 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 KIAA1211LQ6NV74 962 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 DARS2Q6PI48 645 aaKnown RBP14.51□□□□□ -0.09
CHD8-208ENST00000555301 DSG4Q86SJ6 1040 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 C1orf210Q8IVY1 113 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 DTWD2Q8NBA8 298 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 TSEN2Q8NCE0 465 aaKnown RBP14.51□□□□□ -0.09
CHD8-208ENST00000555301 OR2A12Q8NGT7 310 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 OR2T3Q8NH03 318 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 LRRN4Q8WUT4 740 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 OR8D1Q8WZ84 308 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 MS4A14Q96JA4 679 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 VAT1Q99536 393 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 IL12RB2Q99665 862 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 TM6SF2Q9BZW4 377 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 TNKS2Q9H2K2 1166 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 MTG2Q9H4K7 406 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 CD248Q9HCU0 757 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 HECAQ9UBI9 543 aaPredicted RBP14.51□□□□□ -0.09
CHD8-208ENST00000555301 LHX3Q9UBR4 397 aa14.51□□□□□ -0.09
CHD8-208ENST00000555301 R3HDM2Q9Y2K5 976 aaKnown RBP14.51□□□□□ -0.09
CHD8-208ENST00000555301 GOLGA6L10A0A0M3HER8 536 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 TCRBV21S2A2A0A5A6 115 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 CFAP69A5D8W1 941 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 LIASO43766 372 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 STK10O94804 968 aaKnown RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 APBB3O95704 486 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 JCHAINP01591 159 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 VAV1P15498 845 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 RBL1P28749 1068 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 PAFAH1B1P43034 410 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 CSNK1DP48730 415 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 CCNHP51946 323 aaPredicted RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 SATB1Q01826 763 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 BYSLQ13895 437 aaKnown RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 SIX1Q15475 284 aaPredicted RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 TEX44Q53QW1 395 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 RALGPS1Q5JS13 557 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 DRICH1Q6PGQ1 229 aaPredicted RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 DPY19L3Q6ZPD9 716 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 STK40Q8N2I9 435 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 RYBPQ8N488 228 aaPredicted RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 C1orf54Q8WWF1 131 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 NKD2Q969F2 451 aaPredicted RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 LRIG1Q96JA1 1093 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 FAM118BQ9BPY3 351 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 MGME1Q9BQP7 344 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 HEPHQ9BQS7 1158 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 POLR1EQ9GZS1 481 aaKnown RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 RSPH9Q9H1X1 276 aaPredicted RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 NT5MQ9NPB1 228 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 PRMT8Q9NR22 394 aaPredicted RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 POLR3BQ9NW08 1133 aaPredicted RBP14.5□□□□□ -0.09
CHD8-208ENST00000555301 C2orf42Q9NWW7 574 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 SEPT10Q9P0V9 454 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 DNPEPQ9ULA0 475 aa14.5□□□□□ -0.09
CHD8-208ENST00000555301 C1QTNF3-AMACRE9PGA6 284 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 KRIT1O00522 736 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 KCNN4O15554 427 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 POP4O95707 220 aaKnown RBP14.49□□□□□ -0.09
CHD8-208ENST00000555301 PRNPP04156 253 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 CES1P23141 567 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 PTPN3P26045 913 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 HOXA6P31267 233 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 STIP1P31948 543 aaKnown RBP14.49□□□□□ -0.09
CHD8-208ENST00000555301 CHRNA3P32297 505 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 COPAP53621 1224 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 AP1S1P61966 158 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 ZBTB16Q05516 673 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 ZBTB17Q13105 803 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 GRM3Q14832 879 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 MYLK3Q32MK0 819 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 ATXN7L2Q5T6C5 722 aaPredicted RBP14.49□□□□□ -0.09
CHD8-208ENST00000555301 FAM46CQ5VWP2 391 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 ZNF776Q68DI1 518 aaPredicted RBP14.49□□□□□ -0.09
CHD8-208ENST00000555301 B4GALNT4Q76KP1 1039 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 TMPRSS6Q8IU80 811 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 CREG2Q8IUH2 290 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 ATG4AQ8WYN0 398 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 ZNF592Q92610 1267 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 PRCCQ92733 491 aaPredicted RBP14.49□□□□□ -0.09
CHD8-208ENST00000555301 EXOC2Q96KP1 924 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 CAPZA3Q96KX2 299 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 HHIPQ96QV1 700 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 FAM129BQ96TA1 746 aa14.49□□□□□ -0.09
CHD8-208ENST00000555301 BCCIPQ9P287 314 aaKnown RBP eCLIP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms