RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 AGBL4Q5VU57 503 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 DCAF12L1Q5VU92 463 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 TMCO3Q6UWJ1 677 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-214ENST00000554928 CYP2U1Q7Z449 544 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 C11orf74Q86VG3 221 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 PCDH20Q8N6Y1 951 aaKnown RBP12.57□□□□□ -0.4
SYNE2-214ENST00000554928 KCTD6Q8NC69 237 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 TPCN2Q8NHX9 752 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 KRT35Q92764 455 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 FAF2Q96CS3 445 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 CEP44Q9C0F1 390 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 HECAQ9UBI9 543 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-214ENST00000554928 UBA2Q9UBT2 640 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-214ENST00000554928 EVLQ9UI08 416 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-214ENST00000554928 HPCAL4Q9UM19 191 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 ALG6Q9Y672 507 aa12.57□□□□□ -0.4
SYNE2-214ENST00000554928 THADAQ6YHU6 1953 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 SPAG17Q6Q759 2223 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 A0A0A6YYK5 440 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 TTC24A2A3L6 582 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 LRRD1A4D1F6 860 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 FAM47DPA6NHR8 397 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 ARHGAP42A6NI28 874 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 C10orf142B7Z368 130 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 KPNA3O00505 521 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 PJA2O43164 708 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 GDF9O60383 454 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 SEMA4FO95754 770 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 ADH1BP00325 375 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 KRT1P04264 644 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 KRT7P08729 469 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 C5AR1P21730 350 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 OXTRP30559 389 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 VAV2P52735 878 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 ZNF135P52742 658 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 ADPRHP54922 357 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 TAS2R38P59533 333 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 PPP2CBP62714 309 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 PPP2CAP67775 309 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 GBE1Q04446 702 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 SLC10A2Q12908 348 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 NCEH1Q6PIU2 408 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 USP30Q70CQ3 517 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 RYBPQ8N488 228 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 FAM131CQ96AQ9 280 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 RNF25Q96BH1 459 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 OMDQ99983 421 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 ORAI3Q9BRQ5 295 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 ZNF670Q9BS34 389 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 BTBD1Q9H0C5 482 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 ZDHHC6Q9H6R6 413 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 EBF2Q9HAK2 575 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 RCOR3Q9P2K3 495 aaPredicted RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 IL36AQ9UHA7 158 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 IPO11Q9UI26 975 aaKnown RBP12.56□□□□□ -0.4
SYNE2-214ENST00000554928 PILRBQ9UKJ0 227 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 GON4LQ3T8J9 2241 aa12.56□□□□□ -0.4
SYNE2-214ENST00000554928 GRID2IPA4D2P6 1211 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 METTL12A8MUP2 240 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 KRIT1O00522 736 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 ALOX15BO15296 676 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 SPOPO43791 374 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 MAFKO60675 156 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 FSBPO95073 299 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 GSRP00390 522 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 IGHV4-34P06331 123 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 RHOAP61586 193 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 ADCY2Q08462 1091 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 SLC10A7Q0GE19 358 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 PAFAH1B3Q15102 231 aaKnown RBP12.55□□□□□ -0.4
SYNE2-214ENST00000554928 PDK2Q15119 407 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 CSRP2Q16527 193 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 MYLK3Q32MK0 819 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 INO80DQ53TQ3 878 aaPredicted RBP12.55□□□□□ -0.4
SYNE2-214ENST00000554928 ZFYVE27Q5T4F4 411 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 PEAR1Q5VY43 1037 aaPredicted RBP12.55□□□□□ -0.4
SYNE2-214ENST00000554928 MFSD7Q6UXD7 560 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 NPNTQ6UXI9 565 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 PRR23CQ6ZRP0 262 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 PARS2Q7L3T8 475 aaKnown RBP12.55□□□□□ -0.4
SYNE2-214ENST00000554928 PGBD5Q8N414 524 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 TSEN2Q8NCE0 465 aaKnown RBP12.55□□□□□ -0.4
SYNE2-214ENST00000554928 TMIEQ8NEW7 156 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 OR2AP1Q8NGE2 309 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 OR14C36Q8NHC7 312 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 ISG20Q96AZ6 181 aaKnown RBP12.55□□□□□ -0.4
SYNE2-214ENST00000554928 BIRC7Q96CA5 298 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 HEPHQ9BQS7 1158 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 LCMT1Q9UIC8 334 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 PCDHGA5Q9Y5G8 931 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 ZNF292O60281 2723 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 NUP205Q92621 2012 aa12.55□□□□□ -0.4
SYNE2-214ENST00000554928 TNRC6BQ9UPQ9 1833 aaKnown RBP12.55□□□□□ -0.4
SYNE2-214ENST00000554928 CXorf51AA0A1B0GTR3 108 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 GOLGA6L3A6NEY3 463 aa12.54□□□□□ -0.4
SYNE2-214ENST00000554928 ZSCAN5CA6NGD5 496 aaPredicted RBP12.54□□□□□ -0.4
SYNE2-214ENST00000554928 MEI4A8MW99 385 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms