RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 ABCC13Q9NSE7 274 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 LEF1Q9UJU2 399 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 BTBD3Q9Y2F9 522 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 CALCAP01258 141 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ITGA2BP08514 1039 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 YWHAQP27348 245 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 CXCL9Q07325 125 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 LACTB2Q53H82 288 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 CDK20Q8IZL9 346 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 PCSK9Q8NBP7 692 aaKnown RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 MAGEE2Q8TD90 523 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 SEMA4BQ9NPR2 832 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ADARB2Q9NS39 739 aaKnown RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 UBA2Q9UBT2 640 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ZMYM5Q9UJ78 669 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 SNX8Q9Y5X2 465 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 DCCP43146 1447 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 H3BMM5 538 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 MYL12BO14950 172 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 URODP06132 367 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ABCB1P08183 1280 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 USP17L7P0C7H9 530 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 HPCAL1P37235 193 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 ZACNQ401N2 412 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 KIAA0408Q6ZU52 694 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 IRF2BP1Q8IU81 584 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 CENPIQ92674 756 aaPredicted RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 MRPL57Q9BQC6 102 aaKnown RBP14.12□□□□□ -0.15
VTI1B-204ENST00000554659 NUAK2Q9H093 628 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 OR12D3Q9UGF7 316 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 CRYL1Q9Y2S2 319 aa14.12□□□□□ -0.15
VTI1B-204ENST00000554659 MROH2AA6NES4 1674 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 EFCAB10A6NFE3 127 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 BANF1O75531 89 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 EPN2O95208 641 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 MYL12AP19105 171 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 NOS3P29474 1203 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 QPCTQ16769 361 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 KLHL12Q53G59 568 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 VSIG10LQ86VR7 867 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 C12orf56Q8IXR9 622 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 MED8Q96G25 268 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 OSBPL11Q9BXB4 747 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 PNPLA3Q9NST1 481 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 ARHGAP28Q9P2N2 729 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 ITGB1BP2Q9UKP3 347 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 TCRBV9S1A1TA0A576 114 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 TBKBP1A7MCY6 615 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 CYP7B1O75881 506 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 ERBB2P04626 1255 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 CCDC166P0CW27 439 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 PAICSP22234 425 aaKnown RBP14.11□□□□□ -0.15
VTI1B-204ENST00000554659 GPR15P49685 360 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 RHBDL3P58872 404 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 TNFRSF25Q93038 417 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 LENG9Q96B70 501 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 SERAC1Q96JX3 654 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 HSD17B14Q9BPX1 270 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 ACE2Q9BYF1 805 aaPredicted RBP14.11□□□□□ -0.15
VTI1B-204ENST00000554659 FAM126AQ9BYI3 521 aaPredicted RBP14.11□□□□□ -0.15
VTI1B-204ENST00000554659 ARMC7Q9H6L4 198 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 CDH9Q9ULB4 789 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 RNF225M0QZC1 329 aaPredicted RBP14.11□□□□□ -0.15
VTI1B-204ENST00000554659 POMCP01189 267 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 SRP54P61011 504 aaKnown RBP14.11□□□□□ -0.15
VTI1B-204ENST00000554659 CRADDP78560 199 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 PFKFB4Q16877 469 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 RGS21Q2M5E4 152 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 DACT2Q5SW24 774 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 LIPMQ5VYY2 423 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 C4orf32Q8N8J7 132 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 MAGEC3Q8TD91 643 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 KIFC1Q9BW19 673 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 TRIM39Q9HCM9 518 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 DDX3YO15523 660 aaKnown RBP14.11□□□□□ -0.15
VTI1B-204ENST00000554659 TGFB1I1O43294 461 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 S100A9P06702 114 aaKnown RBP14.11□□□□□ -0.15
VTI1B-204ENST00000554659 SPATA31C1P0DKV0 1188 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 DGKAP23743 735 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 ADSSP30520 456 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 ABCG1P45844 678 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 RTP1P59025 263 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 TAS2R40P59535 323 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 RAB10P61026 200 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 ITIH5Q86UX2 942 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 AHI1Q8N157 1196 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 OSBPL6Q9BZF3 934 aa14.11□□□□□ -0.15
VTI1B-204ENST00000554659 CXCL11O14625 94 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 SHOX2O60902 331 aaPredicted RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 MLYCDO95822 493 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 ALDH2P05091 517 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 EIF2B5Q13144 721 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 PTGR2Q8N8N7 351 aaPredicted RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 PWWP2AQ96N64 755 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 ZCCHC2Q9C0B9 1178 aaKnown RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 PLGRKTQ9HBL7 147 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 PRR23AA6NEV1 266 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 IFRD1O00458 451 aaPredicted RBP14.1□□□□□ -0.15
VTI1B-204ENST00000554659 ZMPSTE24O75844 475 aa14.1□□□□□ -0.15
VTI1B-204ENST00000554659 CELF2O95319 508 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms