RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 DLG2Q15700 870 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 WDR45BQ5MNZ6 344 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 LYSMD4Q5XG99 296 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 PMS2CLQ68D20 193 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 RABEPKQ7Z6M1 372 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 MAP7D3Q8IWC1 876 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 CCDC170Q8IYT3 715 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 RTL3Q8N8U3 475 aaKnown RBP8.52□□□□□ -1.05
PSEN1-209ENST00000553855 OLIG1Q8TAK6 271 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 HSPH1Q92598 858 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 LMLNQ96KR4 655 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 OMDQ99983 421 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 BTBD1Q9H0C5 482 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 ARRDC1-AS1Q9H2J1 176 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 ANLNQ9NQW6 1124 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 ITM2CQ9NQX7 267 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 VPS45Q9NRW7 570 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 SPTLC3Q9NUV7 552 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 SLCO3A1Q9UIG8 710 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 KIAA1549LQ6ZVL6 1849 aa8.52□□□□□ -1.05
PSEN1-209ENST00000553855 MYOFQ9NZM1 2061 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 IGHV1OR15-9A0A0B4J2B8 117 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 CXorf51AA0A1B0GTR3 108 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 ARHGAP42A6NI28 874 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 TMEM110-MUSTN1A8MSY1 372 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 ALOX15BO15296 676 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 NRDCO43847 1150 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 LRCH4O75427 683 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 PRNPP04156 253 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 KRT7P08729 469 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 GNSP15586 552 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 SDHBP21912 280 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 MAGEA1P43355 309 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 NOP2P46087 812 aaKnown RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 PSMD8P48556 350 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 NUMBP49757 651 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 STK19P49842 368 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 IRAK1P51617 712 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 COPAP53621 1224 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 OGDHQ02218 1023 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 LMNB2Q03252 620 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 RAD51Q06609 339 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 SPEM2Q0P670 501 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 TBX2Q13207 712 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 PARP15Q460N3 678 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 AASDHQ4L235 1098 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 RAB6CQ53S08 254 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 MANEALQ5VSG8 457 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 ARMCX6Q7L4S7 300 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 FAM124AQ86V42 546 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 TMTC1Q8IUR5 882 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 MMAAQ8IVH4 418 aaKnown RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 TMEFF1Q8IYR6 380 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 ZNF683Q8IZ20 524 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 LINC00528Q8N1L1 170 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 PYROXD2Q8N2H3 581 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 RYBPQ8N488 228 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 SH2D3CQ8N5H7 860 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 PAF1Q8N7H5 531 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 NIPA2Q8N8Q9 360 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 OR7D4Q8NG98 312 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 NSMCE1Q8WV22 266 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 TEKT4Q8WW24 435 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 CASKIN2Q8WXE0 1202 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 PIGKQ92643 395 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 TOE1Q96GM8 510 aaKnown RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 PPP1R16AQ96I34 528 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 HSH2DQ96JZ2 352 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 MRGPRX3Q96LB0 322 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 PANX2Q96RD6 677 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 CHP1Q99653 195 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 SNRNP25Q9BV90 132 aaKnown RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 NUSAP1Q9BXS6 441 aaKnown RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 CEP44Q9C0F1 390 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 TGIF2Q9GZN2 237 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 MKRN2Q9H000 416 aaKnown RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 RAB6CQ9H0N0 254 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 DUSP15Q9H1R2 295 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 SLC6A17Q9H1V8 727 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 RSPH9Q9H1X1 276 aaPredicted RBP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 SGK2Q9HBY8 427 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.51□□□□□ -1.05
PSEN1-209ENST00000553855 GPATCH2LQ9NWQ4 482 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 FBXL12Q9NXK8 326 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 IMPACTQ9P2X3 320 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 SUSD2Q9UGT4 822 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 VPS51Q9UID3 782 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 INTUQ9ULD6 942 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 HS3ST2Q9Y278 367 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 CACNA1IQ9P0X4 2223 aa8.51□□□□□ -1.05
PSEN1-209ENST00000553855 A0A0D9SEW6 157 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 LRRC72A6NJI9 287 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 WASH4PA8MWX3 477 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 PRR5-ARHGAP8B1AHC4 643 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 FAM72CH0Y354 149 aa8.5□□□□□ -1.05
PSEN1-209ENST00000553855 I6L893 689 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 KHNYNO15037 678 aaKnown RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 CAPN5O15484 640 aaPredicted RBP8.5□□□□□ -1.05
PSEN1-209ENST00000553855 BUB1O43683 1085 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms