RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 EIF4EBP2Q13542 120 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CAMK1Q14012 370 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 DPYSL2Q16555 572 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CCNG2Q16589 344 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 DUSP6Q16828 381 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 ATP13A4Q4VNC1 1196 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 ANKRD20A8PQ5CZ79 823 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 KCNT1Q5JUK3 1230 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 TMEM201Q5SNT2 666 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 KAZNQ674X7 775 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 FAM109BQ6ICB4 259 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MFSD7Q6UXD7 560 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 C4orf22Q6V702 233 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 TMEM184AQ6ZMB5 413 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 RBM23Q86U06 439 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 FAM131BQ86XD5 332 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 LRRC49Q8IUZ0 686 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CCDC117Q8IWD4 279 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MMGT1Q8N4V1 131 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 ARFGAP1Q8N6T3 406 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 KIAA1958Q8N8K9 716 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 DTWD2Q8NBA8 298 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SPATA4Q8NEY3 305 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MYRIPQ8NFW9 859 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 VN1R2Q8NFZ6 395 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 FAM71BQ8TC56 605 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CCHCR1Q8TD31 782 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 DQX1Q8TE96 717 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 COG1Q8WTW3 980 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MYLIPQ8WY64 445 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 ALG3Q92685 438 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 KRT35Q92764 455 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 P3H4Q92791 437 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 MAGOHBQ96A72 148 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 PIWIL1Q96J94 861 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SNRNP25Q9BV90 132 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 ASPNQ9BXN1 380 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CALN1Q9BXU9 219 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 BRD8Q9H0E9 1235 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 TKTL2Q9H0I9 626 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 EPB41L4BQ9H329 900 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SLITRK6Q9H5Y7 841 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 TASP1Q9H6P5 420 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 LRRC19Q9H756 370 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SFXN1Q9H9B4 322 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CERS4Q9HA82 394 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 NMUR1Q9HB89 426 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 WDR6Q9NNW5 1121 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 REV1Q9UBZ9 1251 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 OR12D3Q9UGF7 316 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SFMBT1Q9UHJ3 866 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 LSM7Q9UK45 103 aaKnown RBP5.16□□□□□ -1.58
VTI1B-202ENST00000553619 SH3BP1Q9Y3L3 701 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 CORINQ9Y5Q5 1042 aa5.16□□□□□ -1.58
VTI1B-202ENST00000553619 PLXNA3P51805 1871 aa5.15□□□□□ -1.58
VTI1B-202ENST00000553619 DENND4CQ5VZ89 1909 aa5.15□□□□□ -1.58
VTI1B-202ENST00000553619 hCG_1818297A0A087WSY0 165 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 CFAP69A5D8W1 941 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 HACD1B0YJ81 288 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 PI4K2BG5E9Z4 385 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 APOC4-APOC2K7ER74 178 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 PER2O15055 1255 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 CCL16O15467 120 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 FGF10O15520 208 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 CREB3O43889 395 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 ACSL4O60488 711 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 CST8O60676 142 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 PHF2O75151 1096 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 OAS1P00973 400 aaKnown RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 IGLV3-25P01717 112 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 APOC2P02655 101 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 HPXP02790 462 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 RHOP08100 348 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 EPCAMP16422 314 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 POU3F3P20264 500 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 TRHRP34981 398 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 CHKAP35790 457 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 AVPR1AP37288 418 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 CDKN2BP42772 138 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 FNTAP49354 379 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 ARSEP51690 589 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 EPHA5P54756 1037 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 TPI1P60174 286 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 RNF4P78317 190 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 SLC7A9P82251 487 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 XRCC4Q13426 336 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 DHX34Q14147 1143 aaKnown RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 DPYSL3Q14195 570 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 SMTNL2Q2TAL5 461 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 PPP6R3Q5H9R7 873 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 RABGAP1LQ5R372 815 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 ATAT1Q5SQI0 421 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 CES5AQ6NT32 575 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 TRNP1Q6NT89 227 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 DRICH1Q6PGQ1 229 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-202ENST00000553619 BBS12Q6ZW61 710 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 BHLHA9Q7RTU4 235 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 TAC4Q86UU9 113 aa5.15□□□□□ -1.59
VTI1B-202ENST00000553619 MIB1Q86YT6 1006 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms