RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 KRT39Q6A163 491 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 KIAA0895Q8NCT3 520 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 OR52K2Q8NGK3 314 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 SCG3Q8WXD2 468 aaKnown RBP14.11□□□□□ -0.15
PRPF39-204ENST00000553605 PPP1R16AQ96I34 528 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 CATSPER2Q96P56 530 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 MIS12Q9H081 205 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 RAB20Q9NX57 234 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 SIRPGQ9P1W8 387 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 VPS28Q9UK41 221 aa14.11□□□□□ -0.15
PRPF39-204ENST00000553605 PNMA8BQ9ULN7 279 aaPredicted RBP14.11□□□□□ -0.15
PRPF39-204ENST00000553605 DOPEY1Q5JWR5 2465 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 ABCA12Q86UK0 2595 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 STMND1H3BQB6 276 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 CALUO43852 315 aaPredicted RBP14.1□□□□□ -0.15
PRPF39-204ENST00000553605 MT-CO1P00395 513 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 ATP1A2P50993 1020 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 NEK3P51956 506 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 THOP1P52888 689 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 RABEP1Q15276 862 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 RABGAP1LQ5R372 815 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 FHL5Q5TD97 284 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 TAC4Q86UU9 113 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 ATP11CQ8NB49 1132 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 KYQ8NBH2 561 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 CHST14Q8NCH0 376 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 NKD1Q969G9 470 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 EEF2KMTQ96G04 330 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 PRMT1Q99873 361 aaKnown RBP14.1□□□□□ -0.15
PRPF39-204ENST00000553605 B3GNT4Q9C0J1 378 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 HS3ST2Q9Y278 367 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 OR51B4Q9Y5P0 310 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 FADS3Q9Y5Q0 445 aa14.1□□□□□ -0.15
PRPF39-204ENST00000553605 IGLON5A6NGN9 336 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 KCNU1A8MYU2 1149 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 K7ERQ8 282 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 M0QYT0 321 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 POLR2DO15514 142 aaKnown RBP14.09□□□□□ -0.15
PRPF39-204ENST00000553605 FBXO21O94952 628 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 CD2BP2O95400 341 aaKnown RBP14.09□□□□□ -0.15
PRPF39-204ENST00000553605 CELA2BP08218 269 aaPredicted RBP14.09□□□□□ -0.15
PRPF39-204ENST00000553605 ADRB3P13945 408 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 GTF2H1P32780 548 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 ENPEPQ07075 957 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 LVRNQ6Q4G3 990 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 LCLAT1Q6UWP7 414 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 ZSCAN30Q86W11 494 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 ATP6V0D2Q8N8Y2 350 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 FBXL13Q8NEE6 735 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 OR6C4Q8NGE1 309 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 GRIN3AQ8TCU5 1115 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 ABHD17AQ96GS6 310 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 EPAS1Q99814 870 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 C1QTNF2Q9BXJ5 285 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 IL36AQ9UHA7 158 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 SLC12A6Q9UHW9 1150 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 KIAA1257Q9ULG3 409 aa14.09□□□□□ -0.15
PRPF39-204ENST00000553605 SPENQ96T58 3664 aaKnown RBP14.09□□□□□ -0.15
PRPF39-204ENST00000553605 LEFTY1O75610 366 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 KRT7P08729 469 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 LIFP15018 202 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 POU3F2P20265 443 aaPredicted RBP14.08□□□□□ -0.16
PRPF39-204ENST00000553605 KRT83P78385 493 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 PPARDQ03181 441 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 KLRB1Q12918 225 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 STK38Q15208 465 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 ELOCQ15369 112 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 SYPL2Q5VXT5 272 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 CCNJLQ8IV13 435 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 FAM186BQ8IYM0 893 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 FSTL5Q8N475 847 aaPredicted RBP14.08□□□□□ -0.16
PRPF39-204ENST00000553605 IL22RA1Q8N6P7 574 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 Q8N9G6 341 aaPredicted RBP14.08□□□□□ -0.16
PRPF39-204ENST00000553605 DENND6BQ8NEG7 585 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 PCDH19Q8TAB3 1148 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 GPBAR1Q8TDU6 330 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 SSC4DQ8WTU2 575 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 FAM149B1Q96BN6 582 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 HSFY1Q96LI6 401 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.08□□□□□ -0.16
PRPF39-204ENST00000553605 TRAF3IP3Q9Y228 551 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 RNF215Q9Y6U7 377 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 FBN2P35556 2912 aa14.08□□□□□ -0.16
PRPF39-204ENST00000553605 LRBAP50851 2863 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 ZNF891A8MT65 544 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-204ENST00000553605 SMAD6O43541 496 aaKnown RBP14.07□□□□□ -0.16
PRPF39-204ENST00000553605 AP1G1O43747 822 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 KLRC4O43908 158 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 ALPIP09923 528 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 PDCP20941 246 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 RRM1P23921 792 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 NR2F2P24468 414 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 L1CAMP32004 1257 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 PSMC2P35998 433 aaKnown RBP14.07□□□□□ -0.16
PRPF39-204ENST00000553605 RECQLP46063 649 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-204ENST00000553605 NASPP49321 788 aaPredicted RBP14.07□□□□□ -0.16
PRPF39-204ENST00000553605 MLLT10P55197 1068 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 YPEL5P62699 121 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 CENPCQ03188 943 aa14.07□□□□□ -0.16
PRPF39-204ENST00000553605 CUL2Q13617 745 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms