RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 VAV1P15498 845 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 CHRNB2P17787 502 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 TFE3P19532 575 aaPredicted RBP12.09□□□□□ -0.47
SRP54-203ENST00000553544 CXCR3P49682 368 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 STK19P49842 368 aaPredicted RBP12.09□□□□□ -0.47
SRP54-203ENST00000553544 PLK1P53350 603 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 METAP1P53582 386 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 OXCT1P55809 520 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 FMO1Q01740 532 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 CDR2Q01850 454 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 MTA1Q13330 715 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 SYCP1Q15431 976 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 ISXQ2M1V0 245 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 FBXL22Q6P050 247 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 NEK5Q6P3R8 708 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 CCDC81Q6ZN84 652 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 ARCQ7LC44 396 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 BNIPLQ7Z465 357 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 CCAR2Q8N163 923 aaKnown RBP12.09□□□□□ -0.47
SRP54-203ENST00000553544 ANKRD20A12PQ8NF67 263 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 FRS2Q8WU20 508 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 SLC20A1Q8WUM9 679 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 CPA5Q8WXQ8 436 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 IFT43Q96FT9 208 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 BPIFA3Q9BQP9 254 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 ANLNQ9NQW6 1124 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 PIGVQ9NUD9 493 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 ARHGEF38Q9NXL2 777 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 COX16Q9P0S2 106 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 IL17BQ9UHF5 180 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 SATB2Q9UPW6 733 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 HEMK1Q9Y5R4 338 aaPredicted RBP12.09□□□□□ -0.47
SRP54-203ENST00000553544 HS3ST4Q9Y661 456 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 CHD5Q8TDI0 1954 aa12.09□□□□□ -0.47
SRP54-203ENST00000553544 TCAF2A6NFQ2 919 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 MCF2LO15068 1137 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 ALOX15BO15296 676 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 PAGE1O75459 146 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 ADCY5O95622 1261 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 GIMD1P0DJR0 217 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 UNGP13051 313 aaPredicted RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 MYF5P13349 255 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 ATP1A3P13637 1013 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 MMP8P22894 467 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 AKT2P31751 481 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 FLT3P36888 993 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 STAT1P42224 750 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 VASPP50552 380 aaPredicted RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 RNASE9P60153 205 aaKnown RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 UBXN1Q04323 297 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 NME3Q13232 169 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 AUHQ13825 339 aaKnown RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 SKOR2Q2VWA4 1001 aaPredicted RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 SLC25A52Q3SY17 297 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 C2CD6Q53TS8 623 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 C3orf38Q5JPI3 329 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 BRMS1LQ5PSV4 323 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 RABGAP1LQ5R372 815 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 ARTNQ5T4W7 220 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 FAM102AQ5T9C2 384 aaPredicted RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 TTC39BQ5VTQ0 682 aaPredicted RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 AGBL4Q5VU57 503 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 KIAA1614Q5VZ46 1190 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 NAA35Q5VZE5 725 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 CXorf57Q6NSI4 855 aaKnown RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 TRNP1Q6NT89 227 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 PRICKLE2Q7Z3G6 844 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 DCP2Q8IU60 420 aaKnown RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 ZNF683Q8IZ20 524 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 AOPEPQ8N6M6 819 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 TMEM145Q8NBT3 493 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 TPCN2Q8NHX9 752 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 FAM174AQ8TBP5 190 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 IFI44Q8TCB0 444 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 RNF34Q969K3 372 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 ALG14Q96F25 216 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 CALN1Q9BXU9 219 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 TMEM51Q9NW97 253 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 NCKIPSDQ9NZQ3 722 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 STAP1Q9ULZ2 295 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 FARP1Q9Y4F1 1045 aaPredicted RBP12.08□□□□□ -0.48
SRP54-203ENST00000553544 COL12A1Q99715 3063 aa12.08□□□□□ -0.48
SRP54-203ENST00000553544 A0A1W2PQU0 124 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 K7ESM1 405 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 RIOK3O14730 519 aaKnown RBP12.07□□□□□ -0.48
SRP54-203ENST00000553544 ATP9BO43861 1147 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 LZTS3O60299 673 aaPredicted RBP12.07□□□□□ -0.48
SRP54-203ENST00000553544 F9P00740 461 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 PDGFRAP16234 1089 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 PRLRP16471 622 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 CDK11BP21127 795 aaKnown RBP12.07□□□□□ -0.48
SRP54-203ENST00000553544 SULT1E1P49888 294 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 IRAK1P51617 712 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 HNRNPKP61978 463 aaKnown RBP eCLIP12.07□□□□□ -0.48
SRP54-203ENST00000553544 PTP4A2Q12974 167 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 DLG2Q15700 870 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 ARL13BQ3SXY8 428 aa12.07□□□□□ -0.48
SRP54-203ENST00000553544 ANO6Q4KMQ2 910 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms