RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 GRIA4P48058 902 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 CCNHP51946 323 aaPredicted RBP19.63■□□□□ 0.73
PTCH1-227ENST00000553256 NDST2P52849 883 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 TPI1P60174 286 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 POM121L1PQ3SYA9 428 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 BOLA3Q53S33 107 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 ARSIQ5FYB1 569 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 LEKR1Q6ZMV7 388 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 DBX2Q6ZNG2 339 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 POLNQ7Z5Q5 900 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 TRIM69Q86WT6 500 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 MINDY1Q8N5J2 469 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 OR14C36Q8NHC7 312 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 ZDHHC5Q9C0B5 715 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 SLC39A8Q9C0K1 460 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 MIR1-1HGQ9H1L0 117 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 IL36AQ9UHA7 158 aa19.63■□□□□ 0.73
PTCH1-227ENST00000553256 ZSCAN5CA6NGD5 496 aaPredicted RBP19.62■□□□□ 0.73
PTCH1-227ENST00000553256 EEF2KO00418 725 aaKnown RBP19.62■□□□□ 0.73
PTCH1-227ENST00000553256 SPINT1O43278 529 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 KCNK5O95279 499 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 PRNPP04156 253 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 CSRP1P21291 193 aaKnown RBP19.62■□□□□ 0.73
PTCH1-227ENST00000553256 CSNK1EP49674 416 aaKnown RBP19.62■□□□□ 0.73
PTCH1-227ENST00000553256 ZNF135P52742 658 aaPredicted RBP19.62■□□□□ 0.73
PTCH1-227ENST00000553256 CYTH1Q15438 398 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 PPM1JQ5JR12 505 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 TP53INP2Q8IXH6 220 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 TC2NQ8N9U0 490 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 OR2AP1Q8NGE2 309 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 GANCQ8TET4 914 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 TEKT4Q8WW24 435 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 CASKIN2Q8WXE0 1202 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 HEPHQ9BQS7 1158 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 IL21RQ9HBE5 538 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 ETNK2Q9NVF9 386 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 LHX3Q9UBR4 397 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 IP6K2Q9UHH9 426 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 ANAPC7Q9UJX3 599 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 TPX2Q9ULW0 747 aaKnown RBP19.62■□□□□ 0.73
PTCH1-227ENST00000553256 MFHAS1Q9Y4C4 1052 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 PLXNA2O75051 1894 aa19.62■□□□□ 0.73
PTCH1-227ENST00000553256 PCNX2A6NKB5 2137 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 A0A1B0GVT2 93 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 J3KR12 359 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 BNIP3LO60238 219 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 PRAMEF11O60813 436 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 TMCC1O94876 653 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 SYPP08247 313 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 GKP32189 559 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 AFF3P51826 1226 aaKnown RBP19.61■□□□□ 0.73
PTCH1-227ENST00000553256 GEMIN4P57678 1058 aaKnown RBP19.61■□□□□ 0.73
PTCH1-227ENST00000553256 RACK1P63244 317 aaKnown RBP19.61■□□□□ 0.73
PTCH1-227ENST00000553256 KIF19Q2TAC6 998 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 LAYNQ6UX15 382 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 ZNF564Q8TBZ8 553 aaPredicted RBP19.61■□□□□ 0.73
PTCH1-227ENST00000553256 CCDC114Q96M63 670 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 SLC6A18Q96N87 628 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 TM6SF2Q9BZW4 377 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 NHEJ1Q9H9Q4 299 aaPredicted RBP19.61■□□□□ 0.73
PTCH1-227ENST00000553256 UVRAGQ9P2Y5 699 aa19.61■□□□□ 0.73
PTCH1-227ENST00000553256 HECAQ9UBI9 543 aaPredicted RBP19.61■□□□□ 0.73
PTCH1-227ENST00000553256 FAM47DPA6NHR8 397 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 GIPC1O14908 333 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 PEX11BO96011 259 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 TMEM253P0C7T8 217 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 DESP17661 470 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 ITGB7P26010 798 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 CTSKP43235 329 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 SMTNL2Q2TAL5 461 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 ARHGAP36Q6ZRI8 547 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 ERN2Q76MJ5 926 aaKnown RBP19.6■□□□□ 0.73
PTCH1-227ENST00000553256 NETO2Q8NC67 525 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 GRIN3AQ8TCU5 1115 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 CELF6Q96J87 481 aaKnown RBP19.6■□□□□ 0.73
PTCH1-227ENST00000553256 LRIG1Q96JA1 1093 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 CSPG4P5Q96PW8 444 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 PCDH18Q9HCL0 1135 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 PREBQ9HCU5 417 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 ZFR2Q9UPR6 939 aaKnown RBP19.6■□□□□ 0.73
PTCH1-227ENST00000553256 CABIN1Q9Y6J0 2220 aa19.6■□□□□ 0.73
PTCH1-227ENST00000553256 KPNA3O00505 521 aaPredicted RBP19.59■□□□□ 0.73
PTCH1-227ENST00000553256 VILLO15195 856 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 BUB1O43683 1085 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 MTA2O94776 668 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 PROSCO94903 275 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 ADRB1P08588 477 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 H2AFZP0C0S5 128 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 ZNF883P0CG24 379 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 PAPOLAP51003 745 aaKnown RBP19.59■□□□□ 0.73
PTCH1-227ENST00000553256 SLC14A1Q13336 389 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 TCEAL1Q15170 157 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 MYLK3Q32MK0 819 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 TMEM259Q4ZIN3 620 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 PPP6R3Q5H9R7 873 aaPredicted RBP19.59■□□□□ 0.73
PTCH1-227ENST00000553256 ATXN7L2Q5T6C5 722 aaPredicted RBP19.59■□□□□ 0.73
PTCH1-227ENST00000553256 NEK5Q6P3R8 708 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 H2AFVQ71UI9 128 aa19.59■□□□□ 0.73
PTCH1-227ENST00000553256 PARS2Q7L3T8 475 aaKnown RBP19.59■□□□□ 0.73
PTCH1-227ENST00000553256 TMEM145Q8NBT3 493 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms