RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, human

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF40B-216	ENST00000552301	GNS	P15586	552 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	RAD51	Q06609	339 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	SF3A2	Q15428	464 aa	Known RBP	18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	DCAF12L1	Q5VU92	463 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	RAD9B	Q6WBX8	426 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TXLNB	Q8N3L3	684 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	OR2AP1	Q8NGE2	309 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	OR14C36	Q8NHC7	312 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TSC1	Q92574	1164 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	MIR1-1HG	Q9H1L0	117 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	C6orf106	Q9H6K1	298 aa	Predicted RBP	18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	PILRB	Q9UKJ0	227 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301	SARDH	Q9UL12	918 aa		18.8	■□□□□ 0.6
PRPF40B-216	ENST00000552301		A0A0A6YYK5	440 aa	Predicted RBP	18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	LRRD1	A4D1F6	860 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	METTL12	A8MUP2	240 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	SLC7A4	O43246	635 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ZNF821	O75541	412 aa	Predicted RBP	18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	LEFTY1	O75610	366 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	FSBP	O95073	299 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	CTSL	P07711	333 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	CD48	P09326	243 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TGM1	P22735	817 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ADPRH	P54922	357 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	HADHB	P55084	474 aa	Known RBP	18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	NAP1L1	P55209	391 aa	Known RBP	18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	MMRN1	Q13201	1228 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	DPYSL3	Q14195	570 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ATP13A4	Q4VNC1	1196 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TRIM61	Q5EBN2	209 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ARSI	Q5FYB1	569 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	AFMID	Q63HM1	303 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ARHGAP12	Q8IWW6	846 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	RHOT1	Q8IXI2	618 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	PLPP6	Q8IY26	295 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ATPAF2	Q8N5M1	289 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	NETO2	Q8NC67	525 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	OR2T34	Q8NGX1	318 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	OR6K2	Q8NGY2	324 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	CEP76	Q8TAP6	659 aa		18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	NUSAP1	Q9BXS6	441 aa	Known RBP	18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	IPO11	Q9UI26	975 aa	Known RBP	18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TNRC6B	Q9UPQ9	1833 aa	Known RBP	18.79	■□□□□ 0.6
PRPF40B-216	ENST00000552301	PRR5-ARHGAP8	B1AHC4	643 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301		J3KR12	359 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	PLK4	O00444	970 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	KRIT1	O00522	736 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	PALM	O75781	387 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	POP4	O95707	220 aa	Known RBP	18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	KRT1	P04264	644 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	COMT	P21964	271 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	MAOB	P27338	520 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	DRD3	P35462	400 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ARSE	P51690	589 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	METAP1	P53582	386 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ARHGAP8	P85298	464 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	CNTN1	Q12860	1018 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	DUOXA1	Q1HG43	343 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	LRRC38	Q5VT99	294 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	KIAA0895L	Q68EN5	471 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TCEAL6	Q6IPX3	200 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	NCEH1	Q6PIU2	408 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ACRBP	Q8NEB7	543 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	FAM71B	Q8TC56	605 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	NSMCE1	Q8WV22	266 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TCEAL3	Q969E4	200 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	LRIG1	Q96JA1	1093 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	CALR3	Q96L12	384 aa	Known RBP	18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	CINP	Q9BW66	212 aa	Predicted RBP	18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	PDF	Q9HBH1	243 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ETNK2	Q9NVF9	386 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TFR2	Q9UP52	801 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	MFHAS1	Q9Y4C4	1052 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	WASF2	Q9Y6W5	498 aa		18.78	■□□□□ 0.6
PRPF40B-216	ENST00000552301	PI4KA	P42356	2102 aa		18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	BUB1B	O60566	1050 aa	Predicted RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	VAV2	P52735	878 aa		18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	IL10RB	Q08334	325 aa		18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	RFTN1	Q14699	578 aa	Predicted RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ANKRD20A8P	Q5CZ79	823 aa		18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	PEAR1	Q5VY43	1037 aa	Predicted RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ZCCHC9	Q8N567	271 aa	Known RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ARRDC3	Q96B67	414 aa		18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	OSBPL1A	Q9BXW6	950 aa		18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TMEM74B	Q9NUR3	256 aa		18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	DDX56	Q9NY93	547 aa	Known RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	EVL	Q9UI08	416 aa	Predicted RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	EIF2B4	Q9UI10	523 aa	Known RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TPX2	Q9ULW0	747 aa	Known RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	HYOU1	Q9Y4L1	999 aa		18.77	■□□□□ 0.6
PRPF40B-216	ENST00000552301	TBC1D3D	A0A087WVF3	549 aa		18.76	■□□□□ 0.59
PRPF40B-216	ENST00000552301	TBC1D3I	A0A087WXS9	549 aa		18.76	■□□□□ 0.59
PRPF40B-216	ENST00000552301	TBC1D3E	A0A087X179	549 aa		18.76	■□□□□ 0.59
PRPF40B-216	ENST00000552301	TBC1D3K	A0A087X1G2	549 aa		18.76	■□□□□ 0.59
PRPF40B-216	ENST00000552301	TBC1D3F	A6NER0	549 aa	Predicted RBP	18.76	■□□□□ 0.59

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