RNA–Protein interactions for RNA: ENST00000551344.1

DDX54-208, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 872 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-208ENST00000551344 RASA4BC9J798 803 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 EEF2KO00418 725 aaKnown RBP19.34■□□□□ 0.69
DDX54-208ENST00000551344 RASA4O43374 803 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 BUB1O43683 1085 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 LEFTY1O75610 366 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 CYP1A2P05177 515 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 ZNF883P0CG24 379 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 CD59P13987 128 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 KCNA4P22459 653 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 HCAR3P49019 387 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 NDST2P52849 883 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 SNRPD1P62314 119 aaKnown RBP19.34■□□□□ 0.69
DDX54-208ENST00000551344 CA9Q16790 459 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 TSR1Q2NL82 804 aaKnown RBP19.34■□□□□ 0.69
DDX54-208ENST00000551344 KIF19Q2TAC6 998 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 HLA-BQ31612 363 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 INO80DQ53TQ3 878 aaPredicted RBP19.34■□□□□ 0.69
DDX54-208ENST00000551344 PIP5KL1Q5T9C9 394 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 TRIM69Q86WT6 500 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 ZNF354CQ86Y25 554 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 VSTM4Q8IW00 320 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 PEBP4Q96S96 227 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 DNAJC7Q99615 494 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 GAREM1Q9H706 876 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 PREBQ9HCU5 417 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 ZNHIT6Q9NWK9 470 aaKnown RBP19.34■□□□□ 0.69
DDX54-208ENST00000551344 ACTL7AQ9Y615 435 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 PCNX2A6NKB5 2137 aa19.34■□□□□ 0.69
DDX54-208ENST00000551344 VILLO15195 856 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 DAPK3O43293 454 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 GSRP00390 522 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 TPM1P09493 284 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 EIF4A3P38919 411 aaKnown RBP19.33■□□□□ 0.68
DDX54-208ENST00000551344 CCNHP51946 323 aaPredicted RBP19.33■□□□□ 0.68
DDX54-208ENST00000551344 TAS2R38P59533 333 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 SERINC3Q13530 473 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 HNRNPDQ14103 355 aaKnown RBP19.33■□□□□ 0.68
DDX54-208ENST00000551344 N4BP2L1Q5TBK1 243 aaPredicted RBP19.33■□□□□ 0.68
DDX54-208ENST00000551344 CYP4V2Q6ZWL3 525 aaPredicted RBP19.33■□□□□ 0.68
DDX54-208ENST00000551344 ERN2Q76MJ5 926 aaKnown RBP19.33■□□□□ 0.68
DDX54-208ENST00000551344 ADAT2Q7Z6V5 191 aaKnown RBP19.33■□□□□ 0.68
DDX54-208ENST00000551344 NIPA2Q8N8Q9 360 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 OR2AP1Q8NGE2 309 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 GRIN3AQ8TCU5 1115 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 ARRDC3Q96B67 414 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 HMCESQ96FZ2 354 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 NUP85Q9BW27 656 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 IP6K2Q9UHH9 426 aa19.33■□□□□ 0.68
DDX54-208ENST00000551344 SSU72P8A0A1W2PR75 194 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 MYO1FO00160 1098 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 POP4O95707 220 aaKnown RBP19.32■□□□□ 0.68
DDX54-208ENST00000551344 CD38P28907 300 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
DDX54-208ENST00000551344 SLC18A3Q16572 532 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 RFX8Q6ZV50 586 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 DEFB124Q8NES8 71 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 SERAC1Q96JX3 654 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 SLC6A18Q96N87 628 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 KCTD15Q96SI1 283 aaPredicted RBP19.32■□□□□ 0.68
DDX54-208ENST00000551344 TM6SF2Q9BZW4 377 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 LRRC19Q9H756 370 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 NENFQ9UMX5 172 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 DMTF1Q9Y222 760 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 SNX11Q9Y5W9 270 aa19.32■□□□□ 0.68
DDX54-208ENST00000551344 NYNRINQ9P2P1 1898 aaKnown RBP19.32■□□□□ 0.68
DDX54-208ENST00000551344 RNF103O00237 685 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 GIPC1O14908 333 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 DFNA5O60443 496 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 ERCC2P18074 760 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 ITGB7P26010 798 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 CTSKP43235 329 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 C21orf59P57076 290 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 PPP2CBP62714 309 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 PPP2CAP67775 309 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 RAD51Q06609 339 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 ASTE1Q2TB18 679 aaPredicted RBP19.31■□□□□ 0.68
DDX54-208ENST00000551344 MYLK3Q32MK0 819 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 SLC45A4Q5BKX6 768 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 PPP6R3Q5H9R7 873 aaPredicted RBP19.31■□□□□ 0.68
DDX54-208ENST00000551344 LEKR1Q6ZMV7 388 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 DBX2Q6ZNG2 339 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 RYBPQ8N488 228 aaPredicted RBP19.31■□□□□ 0.68
DDX54-208ENST00000551344 KLC2Q9H0B6 622 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 ZWILCHQ9H900 591 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 AASDHPPTQ9NRN7 309 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 TM7SF3Q9NS93 570 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 CWC15Q9P013 229 aaKnown RBP19.31■□□□□ 0.68
DDX54-208ENST00000551344 ANAPC7Q9UJX3 599 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 PCDHGB2Q9Y5G2 931 aa19.31■□□□□ 0.68
DDX54-208ENST00000551344 ARHGAP42A6NI28 874 aa19.3■□□□□ 0.68
DDX54-208ENST00000551344 RNGTTO60942 597 aaKnown RBP19.3■□□□□ 0.68
DDX54-208ENST00000551344 TMCC1O94876 653 aa19.3■□□□□ 0.68
DDX54-208ENST00000551344 IL1R2P27930 398 aa19.3■□□□□ 0.68
DDX54-208ENST00000551344 NEK3P51956 506 aa19.3■□□□□ 0.68
DDX54-208ENST00000551344 SUZ12Q15022 739 aaKnown RBP19.3■□□□□ 0.68
DDX54-208ENST00000551344 DPYSL2Q16555 572 aa19.3■□□□□ 0.68
DDX54-208ENST00000551344 SETMARQ53H47 684 aaPredicted RBP19.3■□□□□ 0.68
DDX54-208ENST00000551344 NAPEPLDQ6IQ20 393 aa19.3■□□□□ 0.68
DDX54-208ENST00000551344 FBXL19Q6PCT2 694 aa19.3■□□□□ 0.68
DDX54-208ENST00000551344 LZTR1Q8N653 840 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms