RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 MAP7D1Q3KQU3 841 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 TMCO4Q5TGY1 634 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 NPNTQ6UXI9 565 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 PLPP6Q8IY26 295 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 CCNYQ8ND76 341 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 TRIM58Q8NG06 486 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 OR2AP1Q8NGE2 309 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 GANCQ8TET4 914 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 HES6Q96HZ4 224 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 SPACA7Q96KW9 195 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 ZNF599Q96NL3 588 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 HEPHQ9BQS7 1158 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 CINPQ9BW66 212 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 HECAQ9UBI9 543 aaPredicted RBP16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 FANCMQ8IYD8 2048 aa16.5■□□□□ 0.23
CHMP1A-209ENST00000550872 ABCA7Q8IZY2 2146 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 MID1O15344 667 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 MAP3K13O43283 966 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 IGSF6O95976 241 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 ADH1BP00325 375 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 C5AR1P21730 350 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 NBL1P41271 181 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 TPMTP51580 245 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 CCNHP51946 323 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 SFSWAPQ12872 951 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 ZNF211Q13398 564 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 SIM2Q14190 667 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 LBRQ14739 615 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 RPS6KA1Q15418 735 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 MYLK3Q32MK0 819 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 TTC31Q49AM3 519 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 ATXN7L2Q5T6C5 722 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 CCDC181Q5TID7 509 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 FAM46CQ5VWP2 391 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 PRR23BQ6ZRT6 265 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 BZW1Q7L1Q6 419 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 FAM160A2Q8N612 972 aaPredicted RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 FRMD1Q8N878 549 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 PIP4K2CQ8TBX8 421 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 LRRN4Q8WUT4 740 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 GDAP1L1Q96MZ0 367 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 TSGA13Q96PP4 275 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 OSBPL8Q9BZF1 889 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 PABPC3Q9H361 631 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 ZDHHC6Q9H6R6 413 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 CD93Q9NPY3 652 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 FBXL12Q9NXK8 326 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 USP36Q9P275 1121 aaKnown RBP16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 LHX3Q9UBR4 397 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 SEPT3Q9UH03 358 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 IL36AQ9UHA7 158 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 SARDHQ9UL12 918 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 PPM1HQ9ULR3 514 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 PYCARDQ9ULZ3 195 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 SCML1Q9UN30 329 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 NCKAP1Q9Y2A7 1128 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 EML5Q05BV3 1969 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 SHROOM3Q8TF72 1996 aa16.49■□□□□ 0.23
CHMP1A-209ENST00000550872 VPS13AQ96RL7 3174 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 IGHV1OR15-9A0A0B4J2B8 117 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 C1QTNF3-AMACRE9PGA6 284 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 KRIT1O00522 736 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 POP4O95707 220 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 PRNPP04156 253 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 CTSLP07711 333 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 C7P10643 843 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 TGM2P21980 687 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 CCNCP24863 283 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 RENBPP51606 427 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 RAD51Q06609 339 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 ADCY2Q08462 1091 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 SLC10A7Q0GE19 358 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 ZNF235Q14590 738 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 PDK1Q15118 436 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 POM121L1PQ3SYA9 428 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 ARSIQ5FYB1 569 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 MEI1Q5TIA1 1274 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 MARC1Q5VT66 337 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 TIGD7Q6NT04 549 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 AADACL2Q6P093 401 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 BBS12Q6ZW61 710 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 FAM124AQ86V42 546 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 BBS5Q8N3I7 341 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 TSEN2Q8NCE0 465 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 TMIEQ8NEW7 156 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 OR6K2Q8NGY2 324 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 GRIN3AQ8TCU5 1115 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 EXOC2Q96KP1 924 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 OMDQ99983 421 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 SAE1Q9UBE0 346 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 EVLQ9UI08 416 aaPredicted RBP16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 EFR3BQ9Y2G0 817 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 WASF2Q9Y6W5 498 aa16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 RIF1Q5UIP0 2472 aaKnown RBP16.48■□□□□ 0.23
CHMP1A-209ENST00000550872 GON4LQ3T8J9 2241 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 A0A1W2PP55 124 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 KPNA3O00505 521 aaPredicted RBP16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 MATN3O15232 486 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 LEFTY1O75610 366 aa16.47■□□□□ 0.23
CHMP1A-209ENST00000550872 PEX11BO96011 259 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms