RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 TTC24A2A3L6 582 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 CTAGE9A4FU28 777 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 CES2O00748 559 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 PPP1R12AO14974 1030 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 MCF2LO15068 1137 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 GSRP00390 522 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 JCHAINP01591 159 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 CTSLP07711 333 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 CCNB1P14635 433 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 CR2P20023 1033 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 RBL1P28749 1068 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 GKP32189 559 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 CCR3P51677 355 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 DGKEP52429 567 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 METAP1P53582 386 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 EIF3EP60228 445 aaKnown RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 IFI35P80217 286 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 AP1B1Q10567 949 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 WASHC5Q12768 1159 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 ZBTB17Q13105 803 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 TMCO4Q5TGY1 634 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 CCDC181Q5TID7 509 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 TIGD7Q6NT04 549 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 BZW1Q7L1Q6 419 aaKnown RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 PLPP6Q8IY26 295 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 OR2T3Q8NH03 318 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 TFB1MQ8WVM0 346 aaKnown RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 C1orf54Q8WWF1 131 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 ATG4AQ8WYN0 398 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 EXOC2Q96KP1 924 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 MRGPRX1Q96LB2 322 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 C16orf45Q96MC5 204 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 QKIQ96PU8 341 aaKnown RBP eCLIP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 PSKH2Q96QS6 385 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 BRD8Q9H0E9 1235 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 RSPH9Q9H1X1 276 aaPredicted RBP13.25□□□□□ -0.29
RAB5C-206ENST00000550406 DNPEPQ9ULA0 475 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 SLC8A2Q9UPR5 921 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 ATP8A1Q9Y2Q0 1164 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 WASF2Q9Y6W5 498 aa13.25□□□□□ -0.29
RAB5C-206ENST00000550406 TCRBV21S2A2A0A5A6 115 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 HACD1B0YJ81 288 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 H7C0C1 242 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 PDE2AO00408 941 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 BNIP3LO60238 219 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 SYNCRIPO60506 623 aaKnown RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 HLA-DQB2P05538 268 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 RBP3P10745 1247 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 TCP1P17987 556 aaKnown RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 NDUFV2P19404 249 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 PTPN3P26045 913 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 DEKP35659 375 aaKnown RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 MMP13P45452 471 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 ATP5OP48047 213 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 PXNP49023 591 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 CCNHP51946 323 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 NRLP54845 237 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 MAXP61244 160 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 RHOAP61586 193 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 RPS14P62263 151 aaKnown RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 NSUN2Q08J23 767 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 STARD3Q14849 445 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 OASLQ15646 514 aaKnown RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 LONRF2Q1L5Z9 754 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 MYLK3Q32MK0 819 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 SLC45A4Q5BKX6 768 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 MARC1Q5VT66 337 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 METTL3Q86U44 580 aaKnown RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 ZSCAN30Q86W11 494 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 RASSF3Q86WH2 238 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 TMPRSS6Q8IU80 811 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 CREG2Q8IUH2 290 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 PRELID2Q8N945 189 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 TTC13Q8NBP0 860 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 MDGA1Q8NFP4 955 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 OR2AP1Q8NGE2 309 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 OR6K2Q8NGY2 324 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 ACTRT1Q8TDG2 376 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 MGME1Q9BQP7 344 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 CINPQ9BW66 212 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 CEP41Q9BYV8 373 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 POLMQ9NP87 494 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 NT5MQ9NPB1 228 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 RBM22Q9NW64 420 aaKnown RBP eCLIP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 HECAQ9UBI9 543 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 SEPT3Q9UH03 358 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 EBF1Q9UH73 591 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 EVLQ9UI08 416 aaPredicted RBP13.24□□□□□ -0.29
RAB5C-206ENST00000550406 PPM1HQ9ULR3 514 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 SAR1BQ9Y6B6 198 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 DOCK9Q9BZ29 2069 aa13.24□□□□□ -0.29
RAB5C-206ENST00000550406 BCLAF3A2AJT9 711 aaKnown RBP13.23□□□□□ -0.29
RAB5C-206ENST00000550406 LAMTOR5O43504 91 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 LIASO43766 372 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 APBB3O95704 486 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 HOXA6P31267 233 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 CASQ1P31415 396 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 CHRNA3P32297 505 aa13.23□□□□□ -0.29
RAB5C-206ENST00000550406 CD68P34810 354 aaPredicted RBP13.23□□□□□ -0.29
RAB5C-206ENST00000550406 CSNK1DP48730 415 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms