RNA–Protein interactions for RNA: ENST00000550375.1

BRF1-217, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 1,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-217ENST00000550375 LHX3Q9UBR4 397 aa17.5■□□□□ 0.39
BRF1-217ENST00000550375 FARP1Q9Y4F1 1045 aaPredicted RBP17.5■□□□□ 0.39
BRF1-217ENST00000550375 AXIN1O15169 862 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 MATN3O15232 486 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 CEP104O60308 925 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 RNASEH1O60930 286 aaKnown RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 GSRP00390 522 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 PSMD8P48556 350 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 RPS14P62263 151 aaKnown RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 SNRPD1P62314 119 aaKnown RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 PPIDQ08752 370 aaKnown RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 ELAVL3Q14576 367 aaKnown RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 ZNF235Q14590 738 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 RFTN1Q14699 578 aaPredicted RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 HS1BP3Q53T59 392 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 FAM182AQ5T1J6 154 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 MARC1Q5VT66 337 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 ZNF776Q68DI1 518 aaPredicted RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 ALYREFQ86V81 257 aaKnown RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 RASSF3Q86WH2 238 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 TSEN2Q8NCE0 465 aaKnown RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 PRSS33Q8NF86 280 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 OR2AP1Q8NGE2 309 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 ACTL9Q8TC94 416 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 GRIN3AQ8TCU5 1115 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 PRCCQ92733 491 aaPredicted RBP17.49■□□□□ 0.39
BRF1-217ENST00000550375 SIPA1Q96FS4 1042 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 ZDHHC6Q9H6R6 413 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 FBRSQ9HAH7 460 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 SEPT10Q9P0V9 454 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 SEPT3Q9UH03 358 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 EBF1Q9UH73 591 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 ANKRD36A6QL64 1941 aa17.49■□□□□ 0.39
BRF1-217ENST00000550375 WDFY4Q6ZS81 3184 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 H0Y858 1186 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 KCNK1O00180 336 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 KRIT1O00522 736 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 MCF2LO15068 1137 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 IGSF6O95976 241 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 IL1BP01584 269 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 GKP32189 559 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 CHRNA3P32297 505 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 RGRP47804 291 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 CCNHP51946 323 aaPredicted RBP17.48■□□□□ 0.39
BRF1-217ENST00000550375 NOMO1Q15155 1222 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 POM121L1PQ3SYA9 428 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 SLC13A5Q86YT5 568 aaPredicted RBP17.48■□□□□ 0.39
BRF1-217ENST00000550375 TFB1MQ8WVM0 346 aaKnown RBP17.48■□□□□ 0.39
BRF1-217ENST00000550375 GDAP1L1Q96MZ0 367 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 NT5MQ9NPB1 228 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.48■□□□□ 0.39
BRF1-217ENST00000550375 EVLQ9UI08 416 aaPredicted RBP17.48■□□□□ 0.39
BRF1-217ENST00000550375 SARDHQ9UL12 918 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 INVSQ9Y283 1065 aa17.48■□□□□ 0.39
BRF1-217ENST00000550375 TTC24A2A3L6 582 aaPredicted RBP17.47■□□□□ 0.39
BRF1-217ENST00000550375 H7C0C1 242 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 MUSKO15146 869 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 INSIG1O15503 277 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 NEBLO76041 1014 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 CTSLP07711 333 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 ACADMP11310 421 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 CCNB1P14635 433 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 HOXA6P31267 233 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 MMP13P45452 471 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 ATP5OP48047 213 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 NRLP54845 237 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 EIF3EP60228 445 aaKnown RBP17.47■□□□□ 0.39
BRF1-217ENST00000550375 ITKQ08881 620 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 KLF1Q13351 362 aaPredicted RBP17.47■□□□□ 0.39
BRF1-217ENST00000550375 PRKD1Q15139 912 aaPredicted RBP17.47■□□□□ 0.39
BRF1-217ENST00000550375 MYLK3Q32MK0 819 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 ZNF528Q3MIS6 628 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 ARSIQ5FYB1 569 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 DSG4Q86SJ6 1040 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 LONP2Q86WA8 852 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 BBS5Q8N3I7 341 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 PGBD5Q8N414 524 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 PIP4K2CQ8TBX8 421 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 RLN3Q8WXF3 142 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 MAML1Q92585 1016 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 HEPHQ9BQS7 1158 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 CEP41Q9BYV8 373 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 BRD8Q9H0E9 1235 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 C10orf88Q9H8K7 445 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 CD93Q9NPY3 652 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 RBM22Q9NW64 420 aaKnown RBP eCLIP17.47■□□□□ 0.39
BRF1-217ENST00000550375 IL36AQ9UHA7 158 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 R3HDM2Q9Y2K5 976 aaKnown RBP17.47■□□□□ 0.39
BRF1-217ENST00000550375 ZKSCAN5Q9Y2L8 839 aa17.47■□□□□ 0.39
BRF1-217ENST00000550375 RNF103O00237 685 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 ALOX15BO15296 676 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 MID1O15344 667 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 GJB3O75712 270 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 JCHAINP01591 159 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 FGGP02679 453 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 DNTTP04053 509 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 SLC8A1P32418 973 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 RENBPP51606 427 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 METAP1P53582 386 aa17.46■□□□□ 0.39
BRF1-217ENST00000550375 MAXP61244 160 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms