RNA–Protein interactions for RNA: ENST00000550346.5

TROAP-212, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 640 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-212ENST00000550346 HMGB4Q8WW32 186 aa13.28□□□□□ -0.28
TROAP-212ENST00000550346 ATG4AQ8WYN0 398 aa13.28□□□□□ -0.28
TROAP-212ENST00000550346 OR8D1Q8WZ84 308 aa13.28□□□□□ -0.28
TROAP-212ENST00000550346 ERLEC1Q96DZ1 483 aa13.28□□□□□ -0.28
TROAP-212ENST00000550346 CINPQ9BW66 212 aaPredicted RBP13.28□□□□□ -0.28
TROAP-212ENST00000550346 L2HGDHQ9H9P8 463 aa13.28□□□□□ -0.28
TROAP-212ENST00000550346 C11orf16Q9NQ32 467 aa13.28□□□□□ -0.28
TROAP-212ENST00000550346 PRSS16Q9NQE7 514 aa13.28□□□□□ -0.28
TROAP-212ENST00000550346 SEPT3Q9UH03 358 aa13.28□□□□□ -0.28
TROAP-212ENST00000550346 ANTXRLA6NF34 631 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 HACD1B0YJ81 288 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 MATN3O15232 486 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 MAFKO60675 156 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 STK10O94804 968 aaKnown RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 IGSF6O95976 241 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 CCNB1P14635 433 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 HSPA9P38646 679 aaKnown RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 EIF3EP60228 445 aaKnown RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 SATB1Q01826 763 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 ZNF33AQ06730 810 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 CKAP4Q07065 602 aaKnown RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 CCDC15Q0P6D6 951 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 XRCC4Q13426 336 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 CAMK2GQ13555 558 aaPredicted RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 CCNG2Q16589 344 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 C9orf64Q5T6V5 341 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 FAM46CQ5VWP2 391 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 DARS2Q6PI48 645 aaKnown RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 TMEM92Q6UXU6 159 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 ARHGAP36Q6ZRI8 547 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 ZNF572Q7Z3I7 529 aaPredicted RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 ZC3H18Q86VM9 953 aaKnown RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 TMPRSS6Q8IU80 811 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 PLPP6Q8IY26 295 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 CCDC13Q8IYE1 715 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 PAF1Q8N7H5 531 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 SPATA4Q8NEY3 305 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 SLC35B2Q8TB61 432 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 PRCCQ92733 491 aaPredicted RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 OLFM3Q96PB7 478 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 CARD6Q9BX69 1037 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 TNKS2Q9H2K2 1166 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 C10orf88Q9H8K7 445 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 SEPT10Q9P0V9 454 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 HECAQ9UBI9 543 aaPredicted RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 FBXO4Q9UKT5 387 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 DNPEPQ9ULA0 475 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 NCKAP1Q9Y2A7 1128 aa13.27□□□□□ -0.29
TROAP-212ENST00000550346 FCF1Q9Y324 198 aaKnown RBP13.27□□□□□ -0.29
TROAP-212ENST00000550346 A0A1W2PQF6 199 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 MCF2LO15068 1137 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 ALOX15BO15296 676 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 GALR2O43603 387 aaPredicted RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 LIASO43766 372 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 SIN3BO75182 1162 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 TMCC1O94876 653 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 PAPSS2O95340 614 aaPredicted RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 GSRP00390 522 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 DNTTP04053 509 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 PRNPP04156 253 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 RBP3P10745 1247 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 CES1P23141 567 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 MMP13P45452 471 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 KCNJ1P48048 391 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 C2orf54Q08AI8 447 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 NSUN2Q08J23 767 aaKnown RBP eCLIP13.26□□□□□ -0.29
TROAP-212ENST00000550346 HNRNPDQ14103 355 aaKnown RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 ELAVL3Q14576 367 aaKnown RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 GRM3Q14832 879 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 CYTH1Q15438 398 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 CYP1B1Q16678 543 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 MYLK3Q32MK0 819 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 USP39Q53GS9 565 aaKnown RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 ZNF776Q68DI1 518 aaPredicted RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 HEATR6Q6AI08 1181 aaKnown RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 ANO7Q6IWH7 933 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 TTC27Q6P3X3 843 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 C22orf39Q6P5X5 142 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 KIAA1324Q6UXG2 1013 aaKnown RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 Q6ZVU0 165 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 STK40Q8N2I9 435 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 FRS2Q8WU20 508 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 PTPRN2Q92932 1015 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 FATE1Q969F0 183 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 MAGOHBQ96A72 148 aaKnown RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 HDAC11Q96DB2 347 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 SIPA1Q96FS4 1042 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 GDAP1L1Q96MZ0 367 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 HHIPQ96QV1 700 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 LGMNQ99538 433 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 HEPHQ9BQS7 1158 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 FAM126AQ9BYI3 521 aaPredicted RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 FRMD8P1Q9BZ68 369 aaPredicted RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 DDX47Q9H0S4 455 aaKnown RBP13.26□□□□□ -0.29
TROAP-212ENST00000550346 IRF2BPLQ9H1B7 796 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 MTG2Q9H4K7 406 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 DYRK4Q9NR20 520 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 HOMER3Q9NSC5 361 aa13.26□□□□□ -0.29
TROAP-212ENST00000550346 RBM22Q9NW64 420 aaKnown RBP eCLIP13.26□□□□□ -0.29
TROAP-212ENST00000550346 GOLGA6L10A0A0M3HER8 536 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms