RNA–Protein interactions for RNA: ENST00000550009.1

COX6A1-203, Transcript of cytochrome c oxidase subunit 6A1, humanhuman

TSL 2

Gene COX6A1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1-203ENST00000550009 CAVIN1Q6NZI2 390 aaKnown RBP16.23■□□□□ 0.19
COX6A1-203ENST00000550009 SCYL2Q6P3W7 929 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 DHRS13Q6UX07 377 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 CCNI2Q6ZMN8 369 aaPredicted RBP16.23■□□□□ 0.19
COX6A1-203ENST00000550009 TRIM72Q6ZMU5 477 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 PARS2Q7L3T8 475 aaKnown RBP16.23■□□□□ 0.19
COX6A1-203ENST00000550009 STRADAQ7RTN6 431 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 PRPF39Q86UA1 669 aaKnown RBP16.23■□□□□ 0.19
COX6A1-203ENST00000550009 ARFGAP1Q8N6T3 406 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 C3orf20Q8ND61 904 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 OSBPL2Q9H1P3 480 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 ZDHHC6Q9H6R6 413 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 RTN4Q9NQC3 1192 aaKnown RBP16.23■□□□□ 0.19
COX6A1-203ENST00000550009 APOBEC2Q9Y235 224 aaKnown RBP16.23■□□□□ 0.19
COX6A1-203ENST00000550009 APC2O95996 2303 aa16.23■□□□□ 0.19
COX6A1-203ENST00000550009 COL27A1Q8IZC6 1860 aaPredicted RBP16.22■□□□□ 0.19
COX6A1-203ENST00000550009 ACACAQ13085 2346 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 RP1P56715 2156 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 SIGLEC16A6NMB1 481 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 SLC7A4O43246 635 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 SPINT1O43278 529 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 TRIM16O95361 564 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 MYF5P13349 255 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 EPHA8P29322 1005 aaPredicted RBP16.22■□□□□ 0.19
COX6A1-203ENST00000550009 ABL2P42684 1182 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 GRK6P43250 576 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 NRG1Q02297 640 aaPredicted RBP16.22■□□□□ 0.19
COX6A1-203ENST00000550009 SFSWAPQ12872 951 aaKnown RBP16.22■□□□□ 0.19
COX6A1-203ENST00000550009 MTA1Q13330 715 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 CA9Q16790 459 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 CARD16Q5EG05 197 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 GCNT7Q6ZNI0 430 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 ERN2Q76MJ5 926 aaKnown RBP16.22■□□□□ 0.19
COX6A1-203ENST00000550009 MCOLN2Q8IZK6 566 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 TMEM145Q8NBT3 493 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 TMIEQ8NEW7 156 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 TBC1D31Q96DN5 1066 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 PEBP4Q96S96 227 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 PPP1R9BQ96SB3 815 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 FUCA2Q9BTY2 467 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 GDF3Q9NR23 364 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 TMEM248Q9NWD8 314 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 UCKL1Q9NWZ5 548 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 FZD10Q9ULW2 581 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 PAXBP1Q9Y5B6 917 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 KIF26BQ2KJY2 2108 aa16.22■□□□□ 0.19
COX6A1-203ENST00000550009 LRP4O75096 1905 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 LRRC53A6NM62 1247 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 INSIG1O15503 277 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 TNFSF14O43557 240 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 CREB3O43889 395 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 PCDH8O95206 1070 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 MBD3O95983 291 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 ITGAVP06756 1048 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 RHOQP17081 205 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 SUZ12Q15022 739 aaKnown RBP16.21■□□□□ 0.19
COX6A1-203ENST00000550009 ZNF542PQ5EBM4 170 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 TPRG1LQ5T0D9 272 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 ACAD10Q6JQN1 1059 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 DNAJC24Q6P3W2 148 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 HORMAD1Q86X24 394 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 SLC22A18ASQ8N1D0 253 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 MFSD2AQ8NA29 543 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 OR13H1Q8NG92 308 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 HMCESQ96FZ2 354 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 CNDP2Q96KP4 475 aaKnown RBP16.21■□□□□ 0.19
COX6A1-203ENST00000550009 CDC6Q99741 560 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 KDM4CQ9H3R0 1056 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 PREBQ9HCU5 417 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 HECAQ9UBI9 543 aaPredicted RBP16.21■□□□□ 0.19
COX6A1-203ENST00000550009 ZFYVE26Q68DK2 2539 aa16.21■□□□□ 0.19
COX6A1-203ENST00000550009 POM121BA6NF01 834 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 GOLGA6L22H0YM25 854 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 ENC1O14682 589 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 PRNPP04156 253 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 CALB1P05937 261 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 SKILP12757 684 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 ADRB3P13945 408 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 CLCN6P51797 869 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 ZNF143P52747 638 aaPredicted RBP16.2■□□□□ 0.18
COX6A1-203ENST00000550009 C1QBPQ07021 282 aaKnown RBP16.2■□□□□ 0.18
COX6A1-203ENST00000550009 MAPK8IP2Q13387 824 aaPredicted RBP16.2■□□□□ 0.18
COX6A1-203ENST00000550009 IQCB1Q15051 598 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 TMEM259Q4ZIN3 620 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 ZNF783Q6ZMS7 281 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 TMPRSS7Q7RTY8 843 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 ZNF571Q7Z3V5 609 aaPredicted RBP16.2■□□□□ 0.18
COX6A1-203ENST00000550009 SLFN11Q7Z7L1 901 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 RYBPQ8N488 228 aaPredicted RBP16.2■□□□□ 0.18
COX6A1-203ENST00000550009 ANKRD20A12PQ8NF67 263 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 BMFQ96LC9 184 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 HEPHQ9BQS7 1158 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 HDAC8Q9BY41 377 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 FTSJ1Q9UET6 329 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 FARP1Q9Y4F1 1045 aaPredicted RBP16.2■□□□□ 0.18
COX6A1-203ENST00000550009 FADS3Q9Y5Q0 445 aa16.2■□□□□ 0.18
COX6A1-203ENST00000550009 URB1O60287 2271 aaKnown RBP16.2■□□□□ 0.18
COX6A1-203ENST00000550009 PRAMEF26H0Y7S4 382 aa16.19■□□□□ 0.18
COX6A1-203ENST00000550009 TRIM38O00635 465 aa16.19■□□□□ 0.18
COX6A1-203ENST00000550009 PAK4O96013 591 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms