RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 ATXN3P54252 364 aaPredicted RBP9.96□□□□□ -0.82
HDAC7-229ENST00000549883 SERINC3Q13530 473 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 CYTH1Q15438 398 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 HLA-BQ31612 363 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 ATP13A4Q4VNC1 1196 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 CARD16Q5EG05 197 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 LRRC73Q5JTD7 316 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 TBC1D3GQ6DHY5 549 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 TBC1D3CQ6IPX1 549 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 KDM7AQ6ZMT4 941 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 RFX8Q6ZV50 586 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 DSG4Q86SJ6 1040 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 PIP4P1Q86T03 277 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 GAS2L3Q86XJ1 694 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 ZNF354CQ86Y25 554 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 ARHGAP12Q8IWW6 846 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 TBC1D3Q8IZP1 549 aaPredicted RBP9.96□□□□□ -0.82
HDAC7-229ENST00000549883 UMODL1-AS1Q8N2C9 162 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 RYBPQ8N488 228 aaPredicted RBP9.96□□□□□ -0.82
HDAC7-229ENST00000549883 PCDH20Q8N6Y1 951 aaKnown RBP9.96□□□□□ -0.82
HDAC7-229ENST00000549883 TMIEQ8NEW7 156 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 OR8K1Q8NGG5 319 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 HSPH1Q92598 858 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 EXOC2Q96KP1 924 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 MYOCQ99972 504 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 CEP44Q9C0F1 390 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 RBSNQ9H1K0 784 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 ZDHHC6Q9H6R6 413 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 GAREM1Q9H706 876 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 LRRC19Q9H756 370 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 ETNK2Q9NVF9 386 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 DNAAF2Q9NVR5 837 aaKnown RBP9.96□□□□□ -0.82
HDAC7-229ENST00000549883 HECAQ9UBI9 543 aaPredicted RBP9.96□□□□□ -0.82
HDAC7-229ENST00000549883 LHX3Q9UBR4 397 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 GGT7Q9UJ14 662 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 ANAPC7Q9UJX3 599 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 ANKRD6Q9Y2G4 727 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.96□□□□□ -0.82
HDAC7-229ENST00000549883 SCINQ9Y6U3 715 aa9.96□□□□□ -0.82
HDAC7-229ENST00000549883 A0A1W2PR77 199 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 LRRC72A6NJI9 287 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 C1QTNF3-AMACRE9PGA6 284 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 H0Y8X5 98 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 KRIT1O00522 736 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 SPINT1O43278 529 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 CBFA2T2O43439 604 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 SH3BP5O60239 455 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 OPHN1O60890 802 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 RNGTTO60942 597 aaKnown RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 RNF8O76064 485 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 SYPP08247 313 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 ADRB1P08588 477 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 CD48P09326 243 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 RARAP10276 462 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 ERCC2P18074 760 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 ITIH2P19823 946 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 AMPD1P23109 780 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 RGRP47804 291 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 PAPOLAP51003 745 aaKnown RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 CCR5P51681 352 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 AFF3P51826 1226 aaKnown RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 AIF1P55008 147 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 IL9RQ01113 521 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 SLC25A11Q02978 314 aaKnown RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 SLC20A2Q08357 652 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 MMRN1Q13201 1228 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 TBX2Q13207 712 aaPredicted RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 DPYSQ14117 519 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 FAM46CQ5VWP2 391 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 AFMIDQ63HM1 303 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 SEL1L3Q68CR1 1132 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 PARS2Q7L3T8 475 aaKnown RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 RABEPKQ7Z6M1 372 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 IQCDQ96DY2 449 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 TRIM11Q96F44 468 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 SERAC1Q96JX3 654 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 NSMCE3Q96MG7 304 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 HEPHQ9BQS7 1158 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 CATSPERBQ9H7T0 1116 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 PDFQ9HBH1 243 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 MRPL47Q9HD33 250 aaKnown RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 OSGEPQ9NPF4 335 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 FZD3Q9NPG1 666 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 AASDHPPTQ9NRN7 309 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 ABHD10Q9NUJ1 306 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 SPTLC3Q9NUV7 552 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 ZFR2Q9UPR6 939 aaKnown RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 ITM2BQ9Y287 266 aa9.95□□□□□ -0.82
HDAC7-229ENST00000549883 ARID1BQ8NFD5 2236 aaPredicted RBP9.95□□□□□ -0.82
HDAC7-229ENST00000549883 A0A1W2PQU0 124 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 TTC24A2A3L6 582 aaPredicted RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 TMEM110-MUSTN1A8MSY1 372 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 SLC31A1O15431 190 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 FGF10O15520 208 aaPredicted RBP9.94□□□□□ -0.82
HDAC7-229ENST00000549883 MFAP3LO75121 409 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 PRNPP04156 253 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 UGT2B4P06133 528 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 TPM3P06753 285 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 SPINK2P20155 84 aa9.94□□□□□ -0.82
HDAC7-229ENST00000549883 CSRP1P21291 193 aaKnown RBP9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms