RNA–Protein interactions for RNA: ENST00000548874.5

CACNB3-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 581 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-210ENST00000548874 PRELID2Q8N945 189 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 TSEN2Q8NCE0 465 aaKnown RBP21.43■■□□□ 1.02
CACNB3-210ENST00000548874 OR2A12Q8NGT7 310 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 C1orf54Q8WWF1 131 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 CINPQ9BW66 212 aaPredicted RBP21.43■■□□□ 1.02
CACNB3-210ENST00000548874 TNKS2Q9H2K2 1166 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 AMACRQ9UHK6 382 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 DNPEPQ9ULA0 475 aa21.43■■□□□ 1.02
CACNB3-210ENST00000548874 MTSS1O43312 755 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 SYNCRIPO60506 623 aaKnown RBP21.42■■□□□ 1.02
CACNB3-210ENST00000548874 C7P10643 843 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 RBL1P28749 1068 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 AVPR2P30518 371 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 HSPA9P38646 679 aaKnown RBP21.42■■□□□ 1.02
CACNB3-210ENST00000548874 DGKEP52429 567 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 WASHC5Q12768 1159 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 ZBTB17Q13105 803 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 ZNF235Q14590 738 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 OASLQ15646 514 aaKnown RBP21.42■■□□□ 1.02
CACNB3-210ENST00000548874 CARD16Q5EG05 197 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 BBS5Q8N3I7 341 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 PGBD5Q8N414 524 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 OR2AP1Q8NGE2 309 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 HTR3CQ8WXA8 447 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 VOPP1Q96AW1 172 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 MGME1Q9BQP7 344 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 TM6SF2Q9BZW4 377 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 C10orf88Q9H8K7 445 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 FBRSQ9HAH7 460 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 USP29Q9HBJ7 922 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 ZDBF2Q9HCK1 2354 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 RNF14Q9UBS8 474 aa21.42■■□□□ 1.02
CACNB3-210ENST00000548874 ALOX15BO15296 676 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 ZNF189O75820 626 aaPredicted RBP21.41■■□□□ 1.02
CACNB3-210ENST00000548874 JCHAINP01591 159 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 CR2P20023 1033 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 PTPN3P26045 913 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 RGRP47804 291 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 CSNK1DP48730 415 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 CCR3P51677 355 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 COPAP53621 1224 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 SNRPD1P62314 119 aaKnown RBP21.41■■□□□ 1.02
CACNB3-210ENST00000548874 SATB1Q01826 763 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 NSUN2Q08J23 767 aaKnown RBP eCLIP21.41■■□□□ 1.02
CACNB3-210ENST00000548874 ELAVL3Q14576 367 aaKnown RBP21.41■■□□□ 1.02
CACNB3-210ENST00000548874 HEATR6Q6AI08 1181 aaKnown RBP21.41■■□□□ 1.02
CACNB3-210ENST00000548874 ALG1LQ6GMV1 187 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 DARS2Q6PI48 645 aaKnown RBP21.41■■□□□ 1.02
CACNB3-210ENST00000548874 DPY19L3Q6ZPD9 716 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 CNTD1Q8N815 330 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 OR2T3Q8NH03 318 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 CAPZA3Q96KX2 299 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 CCDC114Q96M63 670 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 GDAP1L1Q96MZ0 367 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 FAM129BQ96TA1 746 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 HOMER3Q9NSC5 361 aa21.41■■□□□ 1.02
CACNB3-210ENST00000548874 RBM22Q9NW64 420 aaKnown RBP eCLIP21.41■■□□□ 1.02
CACNB3-210ENST00000548874 IGSF6O95976 241 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 HLA-DQB2P05538 268 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 CXCL12P48061 93 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 CCNHP51946 323 aaPredicted RBP21.4■■□□□ 1.02
CACNB3-210ENST00000548874 BYSLQ13895 437 aaKnown RBP21.4■■□□□ 1.02
CACNB3-210ENST00000548874 CYP1B1Q16678 543 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 TEX44Q53QW1 395 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 ATXN7L2Q5T6C5 722 aaPredicted RBP21.4■■□□□ 1.02
CACNB3-210ENST00000548874 STK40Q8N2I9 435 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 C12orf50Q8NA57 414 aaPredicted RBP21.4■■□□□ 1.02
CACNB3-210ENST00000548874 DTWD2Q8NBA8 298 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 EXOC2Q96KP1 924 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 VAT1Q99536 393 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 C1QTNF1Q9BXJ1 281 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 RSPH9Q9H1X1 276 aaPredicted RBP21.4■■□□□ 1.02
CACNB3-210ENST00000548874 POLMQ9NP87 494 aaPredicted RBP21.4■■□□□ 1.02
CACNB3-210ENST00000548874 NT5MQ9NPB1 228 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 PRMT8Q9NR22 394 aaPredicted RBP21.4■■□□□ 1.02
CACNB3-210ENST00000548874 SPATA6Q9NWH7 488 aaPredicted RBP21.4■■□□□ 1.02
CACNB3-210ENST00000548874 SEPT10Q9P0V9 454 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 ATP8A1Q9Y2Q0 1164 aa21.4■■□□□ 1.02
CACNB3-210ENST00000548874 KMT2EQ8IZD2 1858 aa21.39■■□□□ 1.02
CACNB3-210ENST00000548874 CFAP69A5D8W1 941 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 ESPNB1AK53 854 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 RNF103O00237 685 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 PDE2AO00408 941 aaPredicted RBP21.39■■□□□ 1.01
CACNB3-210ENST00000548874 BNIP3LO60238 219 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 ZNF500O60304 480 aaPredicted RBP21.39■■□□□ 1.01
CACNB3-210ENST00000548874 RECQLP46063 649 aaPredicted RBP21.39■■□□□ 1.01
CACNB3-210ENST00000548874 TMEM31Q5JXX7 168 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 CHST14Q8NCH0 376 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 OR8D1Q8WZ84 308 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 TEKT5Q96M29 485 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 TMEM121Q9BTD3 319 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 AP1M1Q9BXS5 423 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 CEP41Q9BYV8 373 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 MKRN2Q9H000 416 aaKnown RBP21.39■■□□□ 1.01
CACNB3-210ENST00000548874 HECAQ9UBI9 543 aaPredicted RBP21.39■■□□□ 1.01
CACNB3-210ENST00000548874 DRG1Q9Y295 367 aaKnown RBP21.39■■□□□ 1.01
CACNB3-210ENST00000548874 WASF2Q9Y6W5 498 aa21.39■■□□□ 1.01
CACNB3-210ENST00000548874 TCRBV21S2A2A0A5A6 115 aa21.38■■□□□ 1.01
CACNB3-210ENST00000548874 K7ESF4 209 aa21.38■■□□□ 1.01
CACNB3-210ENST00000548874 KRIT1O00522 736 aa21.38■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms