RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-210ENST00000547374 ANO4Q32M45 955 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 GPRIN1Q7Z2K8 1008 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 ATPAF2Q8N5M1 289 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 OR52K2Q8NGK3 314 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 GAD1Q99259 594 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 FAM96AQ9H5X1 160 aa13.17□□□□□ -0.3
BRF1-210ENST00000547374 RBM22Q9NW64 420 aaKnown RBP eCLIP13.17□□□□□ -0.3
BRF1-210ENST00000547374 NR5A2O00482 541 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 LRIG2O94898 1065 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 FAM58BPP0C7Q3 252 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 NPR3P17342 541 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 EEF1B2P24534 225 aaKnown RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 YWHAQP27348 245 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 GRIA3P42263 894 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 PTPN9P43378 593 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 INHBEP58166 350 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 TAS2R39P59534 338 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 CDKL1Q00532 357 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 ARHGAP1Q07960 439 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 SPON1Q9HCB6 807 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 RBBP6Q7Z6E9 1792 aaKnown RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 OR51F1A6NGY5 319 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 G3V2L1 256 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 PDLIM1O00151 329 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 DLX3O60479 287 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 ACADSBP45954 432 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 MTTPP55157 894 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 FASTKQ14296 549 aaKnown RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 CAPRIN1Q14444 709 aaKnown RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 CEP97Q8IW35 865 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 TMIGD2Q96BF3 282 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 B3GALT6Q96L58 329 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 KLHL5Q96PQ7 755 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 RTKNQ9BST9 563 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 ALG9Q9H6U8 611 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 COQ10BQ9H8M1 238 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 ZNF112Q9UJU3 913 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 SORCS3Q9UPU3 1222 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 RAP2CQ9Y3L5 183 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 PTGDR2Q9Y5Y4 395 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 UBA6A0AVT1 1052 aaPredicted RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 POMCP01189 267 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 CCDC166P0CW27 439 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 PSME3P61289 254 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 NSUN2Q08J23 767 aaKnown RBP eCLIP13.16□□□□□ -0.3
BRF1-210ENST00000547374 FOXD4Q12950 439 aaPredicted RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 LIPMQ5VYY2 423 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 ITPRIPL1Q6GPH6 555 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 C4orf22Q6V702 233 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 RTP4Q96DX8 246 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 ZNF560Q96MR9 790 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 C1orf21Q9H246 121 aa13.16□□□□□ -0.3
BRF1-210ENST00000547374 COPG1Q9Y678 874 aaKnown RBP13.16□□□□□ -0.3
BRF1-210ENST00000547374 ASB14A6NK59 587 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 E7ENX8 843 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 SLC25A27O95847 323 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 EDNRBP24530 442 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 GRM5P41594 1212 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 PRKAA1Q13131 559 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 RBM20Q5T481 1227 aaKnown RBP13.15□□□□□ -0.3
BRF1-210ENST00000547374 CNSTQ6PJW8 725 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 ZBTB49Q6ZSB9 765 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 GALNT8Q9NY28 637 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 STK39Q9UEW8 545 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 MTF2Q9Y483 593 aaPredicted RBP13.15□□□□□ -0.3
BRF1-210ENST00000547374 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 QSER1Q2KHR3 1735 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 RNASEH2AO75792 299 aaKnown RBP13.15□□□□□ -0.3
BRF1-210ENST00000547374 AP2A1O95782 977 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 PRKCGP05129 697 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 SLC26A2P50443 739 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 LILRA4P59901 499 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 KLHDC10Q6PID8 442 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 LILRA2Q8N149 483 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 NAT16Q8N8M0 369 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 NLGN2Q8NFZ4 835 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 TMEM40Q8WWA1 233 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 LPGAT1Q92604 370 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 MLPHQ9BV36 600 aaPredicted RBP13.15□□□□□ -0.3
BRF1-210ENST00000547374 SARS2Q9NP81 518 aaKnown RBP13.15□□□□□ -0.3
BRF1-210ENST00000547374 BCAP29Q9UHQ4 241 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 LOXHD1Q8IVV2 1947 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 UBDO15205 165 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 B3GAT3O94766 335 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 SETSIPP0DME0 302 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 HOXA11P31270 313 aaPredicted RBP13.15□□□□□ -0.3
BRF1-210ENST00000547374 STX1BP61266 288 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 CDH17Q12864 832 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 PTPRCAPQ14761 206 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 NAPEPLDQ6IQ20 393 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 SCAMP5Q8TAC9 235 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 GPR152Q8TDT2 470 aa13.15□□□□□ -0.3
BRF1-210ENST00000547374 HEXDCQ8WVB3 486 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms