RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 INVSQ9Y283 1065 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 POLRMTO00411 1230 aaKnown RBP12.95□□□□□ -0.34
PTCH1-212ENST00000546744 ONECUT3O60422 494 aaPredicted RBP12.95□□□□□ -0.34
PTCH1-212ENST00000546744 TBX10O75333 385 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 CYP2C18P33260 490 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 FLT3P36888 993 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 BST2Q10589 180 aaKnown RBP12.95□□□□□ -0.34
PTCH1-212ENST00000546744 MAMLD1Q13495 774 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 MOGQ16653 247 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 DGKKQ5KSL6 1271 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 HERC6Q8IVU3 1022 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 KRT78Q8N1N4 520 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 ARL10Q8N8L6 244 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 UBA3Q8TBC4 463 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 ROPN1LQ96C74 230 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 PPP3R2Q96LZ3 170 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 MARCH7Q9H992 704 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 DDIT4Q9NX09 232 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 KLHL28Q9NXS3 571 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 SPASTQ9UBP0 616 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 RIC1Q4ADV7 1423 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 BCLAF3A2AJT9 711 aaKnown RBP12.95□□□□□ -0.34
PTCH1-212ENST00000546744 KLF11O14901 512 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 PPIBP23284 216 aaKnown RBP12.95□□□□□ -0.34
PTCH1-212ENST00000546744 SOX11P35716 441 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 PCSK7Q16549 785 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 PMF1Q6P1K2 205 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 SATL1Q86VE3 508 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 KCNQ5Q9NR82 932 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 PFDN2Q9UHV9 154 aa12.95□□□□□ -0.34
PTCH1-212ENST00000546744 LOC100506127A0A0U1RQW1 187 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 PAPSS1O43252 624 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 NOS1APO75052 506 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 CYP3A4P08684 503 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 MIPP30301 263 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 S100A3P33764 101 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 AVPR1AP37288 418 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 SLC26A2P50443 739 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 HIRAP54198 1017 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 LRFN2Q9ULH4 789 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 SSR3Q9UNL2 185 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 NWD2Q9ULI1 1742 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 MGAT4DA6NG13 374 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 DNAJB5O75953 348 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 DBTP11182 482 aaKnown RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 CHRM1P11229 460 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 RENBPP51606 427 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 CCNG1P51959 295 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 ELP6Q0PNE2 266 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 ZNF549Q6P9A3 640 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 XKRXQ6PP77 449 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 SPATA2LQ8IUW3 424 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 PSTKQ8IV42 348 aaKnown RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 CLYBLQ8N0X4 340 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 STAG3L4Q8TBR4 150 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 CRAMP1Q96RY5 1269 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 GPR63Q9BZJ6 419 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 HIPK3Q9H422 1215 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 PDGFCQ9NRA1 345 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 ZNF624Q9P2J8 865 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 BARX2Q9UMQ3 279 aaPredicted RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 POMPQ9Y244 141 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 ITGB4P16144 1822 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 NFKB1P19838 968 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 TPSB2P20231 275 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 PAICSP22234 425 aaKnown RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 FGFR3P22607 806 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 POU1F1P28069 291 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 PEX2P28328 305 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 GRIA4P48058 902 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 SLC5A3P53794 718 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 PSMD4P55036 377 aaKnown RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 ITGA7Q13683 1181 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 TPSAB1Q15661 275 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 SLC1A5Q15758 541 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 PCID2Q5JVF3 399 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 AMIGO2Q86SJ2 522 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 UNC5BQ8IZJ1 945 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 DSELQ8IZU8 1212 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 GMCL1P1Q8NEA9 526 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 SPPL2AQ8TCT8 520 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 DCPSQ96C86 337 aaKnown RBP12.94□□□□□ -0.34
PTCH1-212ENST00000546744 ASB7Q9H672 318 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 STXBP5LQ9Y2K9 1186 aa12.94□□□□□ -0.34
PTCH1-212ENST00000546744 C19orf81C9J6K1 198 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 PRMT5O14744 637 aaPredicted RBP12.93□□□□□ -0.34
PTCH1-212ENST00000546744 PLA2G6O60733 806 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 NCAM1P13591 858 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 RARRES1P49788 294 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 PAGE2BQ5JRK9 111 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 KCNT2Q6UVM3 1135 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 SPESP1Q6UW49 350 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 CYP2U1Q7Z449 544 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 P2RY8Q86VZ1 359 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 NKAPQ8N5F7 415 aaKnown RBP12.93□□□□□ -0.34
PTCH1-212ENST00000546744 CLPBQ9H078 707 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 EBF3Q9H4W6 596 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 STON1Q9Y6Q2 735 aa12.93□□□□□ -0.34
PTCH1-212ENST00000546744 JCHAINP01591 159 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms