RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 LONP2Q86WA8 852 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 CDKL3Q8IVW4 592 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 C17orf53Q8N3J3 647 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.42□□□□□ -1.38
LTBR-212ENST00000543542 TTC13Q8NBP0 860 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 MDGA1Q8NFP4 955 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 OR2AP1Q8NGE2 309 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 OR6K2Q8NGY2 324 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 GRIN3AQ8TCU5 1115 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 TFB1MQ8WVM0 346 aaKnown RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 MAIP1Q8WWC4 291 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 ATOH1Q92858 354 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 PTPRN2Q92932 1015 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 HDAC11Q96DB2 347 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 MYO19Q96H55 970 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 PPP1R16AQ96I34 528 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 ZNF599Q96NL3 588 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 LGMNQ99538 433 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 OMDQ99983 421 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 FAM118BQ9BPY3 351 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 HEPHQ9BQS7 1158 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 FAM126AQ9BYI3 521 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 IRF2BPLQ9H1B7 796 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 CARD9Q9H257 536 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 NT5MQ9NPB1 228 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 SCUBE2Q9NQ36 999 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 PRMT8Q9NR22 394 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 RBM22Q9NW64 420 aaKnown RBP eCLIP6.42□□□□□ -1.38
LTBR-212ENST00000543542 SAE1Q9UBE0 346 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 IL36AQ9UHA7 158 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 EVLQ9UI08 416 aaPredicted RBP6.42□□□□□ -1.38
LTBR-212ENST00000543542 CYP8B1Q9UNU6 501 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 INVSQ9Y283 1065 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 EFR3BQ9Y2G0 817 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 CHD5Q8TDI0 1954 aa6.42□□□□□ -1.38
LTBR-212ENST00000543542 MUC3AQ02505 3323 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 CXorf51AA0A1B0GTR3 108 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 A0A1W2PP55 124 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 CTAGE9A4FU28 777 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 FAM47DPA6NHR8 397 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 HACD1B0YJ81 288 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 K7ESF4 209 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 KCNK1O00180 336 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 ALOX15BO15296 676 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 MID1O15344 667 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 MAFKO60675 156 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 ZNF217O75362 1048 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 LEFTY1O75610 366 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 PAPSS2O95340 614 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 POP4O95707 220 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 CD160O95971 181 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 JCHAINP01591 159 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 FGGP02679 453 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 ATP1A1P05023 1023 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 UGT2B4P06133 528 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 CCNB1P14635 433 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 CASQ1P31415 396 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 SLC8A1P32418 973 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 PTPN7P35236 360 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 HSPA9P38646 679 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 TNNT3P45378 269 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 VASPP50552 380 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 COPAP53621 1224 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 PTPN5P54829 565 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 MAXP61244 160 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 RPS14P62263 151 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 OTUD4Q01804 1114 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 BCL2L1Q07817 233 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 ADCY2Q08462 1091 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 PPIDQ08752 370 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 DMWDQ09019 674 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 SLC10A7Q0GE19 358 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 CCDC15Q0P6D6 951 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 SLC10A2Q12908 348 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 HNRNPDQ14103 355 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 CYTH1Q15438 398 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 CST6Q15828 149 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 TAZQ16635 292 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 MYLK3Q32MK0 819 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 ZNF528Q3MIS6 628 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 HS1BP3Q53T59 392 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 DCAF12L1Q5VU92 463 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 GDPD4Q6W3E5 623 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 MAMSTRQ6ZN01 415 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 DPY19L3Q6ZPD9 716 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 PRR23BQ6ZRT6 265 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 SRLQ86TD4 932 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 WDR5BQ86VZ2 330 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 SLC13A5Q86YT5 568 aaPredicted RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 HDDC3Q8N4P3 179 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 TSEN2Q8NCE0 465 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 CHST14Q8NCH0 376 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 OR2A12Q8NGT7 310 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 PIP4K2CQ8TBX8 421 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 ACTL9Q8TC94 416 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 FRS2Q8WU20 508 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 PDCD6IPQ8WUM4 868 aaKnown RBP6.41□□□□□ -1.38
LTBR-212ENST00000543542 RLN3Q8WXF3 142 aa6.41□□□□□ -1.38
LTBR-212ENST00000543542 ISG20Q96AZ6 181 aaKnown RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms