RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 C17orf99Q6UX52 265 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC39A5Q6ZMH5 540 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 LRRC55Q6ZSA7 311 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 ARHGEF18Q6ZSZ5 1173 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 RAPH1Q70E73 1250 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 RTL10Q7L3V2 364 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 MAVSQ7Z434 540 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 TADA2BQ86TJ2 420 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 TAX1BP1Q86VP1 789 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 EPHX4Q8IUS5 362 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 TMEM132CQ8N3T6 1108 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 TTC9BQ8N6N2 239 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 PNPLA1Q8N8W4 532 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 NAT8LQ8N9F0 302 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 B3GALNT2Q8NCR0 500 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 SRFBP1Q8NEF9 429 aaKnown RBP4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 APPL2Q8NEU8 664 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 OR8H1Q8NGG4 311 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 XAGE5Q8WWM1 108 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 MIEF2Q96C03 454 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 RNF31Q96EP0 1072 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 CCDC34Q96HJ3 373 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 DCLRE1CQ96SD1 692 aaKnown RBP4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 OPA3Q9H6K4 179 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 TRPV4Q9HBA0 871 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 INTS13Q9NVM9 706 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 NCKIPSDQ9NZQ3 722 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 WDR35Q9P2L0 1181 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 FBXL17Q9UF56 701 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 EIF2B4Q9UI10 523 aaKnown RBP4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 GPRASP1Q5JY77 1395 aa4.13□□□□□ -1.75
SFSWAP-211ENST00000542813 PTPRKQ15262 1439 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TRAPPC8Q9Y2L5 1435 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 RICTORQ6R327 1708 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TRGV11A0A075B6L2 103 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 URADA6NGE7 173 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 C17orf100A8MU93 164 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 GOLGA6L6A8MZA4 724 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 C19orf81C9J6K1 198 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 C1QTNF3-AMACRE9PGA6 284 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 CES2O00748 559 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 MATN3O15232 486 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 HTATSF1O43719 755 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 AKAP8O43823 692 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 PSMD10O75832 226 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 GOSR1O95249 250 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 IPO7O95373 1038 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 PLATP00750 562 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ABCB1P08183 1280 aaPredicted RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 CPT2P23786 658 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 PSMA3P25788 255 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 POU1F1P28069 291 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TLX1P31314 330 aaPredicted RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC8A1P32418 973 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 JAK3P52333 1124 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 STAT2P52630 851 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 VAV2P52735 878 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 EFNA5P52803 228 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 HDAC4P56524 1084 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 BPIFB3P59826 476 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 DDR1Q08345 913 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 CAMK2DQ13557 499 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 RRP1BQ14684 758 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 CYP1B1Q16678 543 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ASTE1Q2TB18 679 aaPredicted RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ZNF805Q5CZA5 627 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TREML2Q5T2D2 321 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TEDDM1Q5T9Z0 273 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ATG9BQ674R7 924 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SP5Q6BEB4 398 aaPredicted RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 KIAA0930Q6ICG6 404 aaPredicted RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ZNF449Q6P9G9 518 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SLC2A7Q6PXP3 512 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TSSK4Q6SA08 328 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 PET117Q6UWS5 81 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SERPINA13PQ6UXR4 307 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 PARS2Q7L3T8 475 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 CHST3Q7LGC8 479 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 RNF144BQ7Z419 303 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 GDF7Q7Z4P5 450 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 KBTBD6Q86V97 674 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 METTL23Q86XA0 190 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 UNC45BQ8IWX7 931 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 GSPT2Q8IYD1 628 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ANKRD35Q8N283 1001 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 GHDCQ8N2G8 530 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 CPXM2Q8N436 756 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 ADPRHL1Q8NDY3 354 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 C2CD4CQ8TF44 421 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 DUSP19Q8WTR2 217 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 DEPDC1BQ8WUY9 529 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 HSPH1Q92598 858 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SECISBP2LQ93073 1101 aaKnown RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 GTF3C6Q969F1 213 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 NACC2Q96BF6 587 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 TBC1D31Q96DN5 1066 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 SIPA1Q96FS4 1042 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 RAB3IPQ96QF0 476 aaPredicted RBP4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 PRR25Q96S07 402 aa4.12□□□□□ -1.75
SFSWAP-211ENST00000542813 MNTQ99583 582 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms