RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SERPINB11Q96P15 392 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 GATA5Q9BWX5 397 aaPredicted RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 PRKD2Q9BZL6 878 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 UBE2OQ9C0C9 1292 aaKnown RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 COG4Q9H9E3 785 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 TBC1D13Q9NVG8 400 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 RAP2CQ9Y3L5 183 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 NYNRINQ9P2P1 1898 aaKnown RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 FRMPD3Q5JV73 1810 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 MYLKQ15746 1914 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 NUP205Q92621 2012 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 KCNU1A8MYU2 1149 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 TARM1B6A8C7 271 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 SLCO1B7G3V0H7 640 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 SEPT4O43236 478 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 PGK1P00558 417 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 SLC35E2BP0CK96 405 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 PAMP19021 973 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 GLDCP23378 1020 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 GMPRP36959 345 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 ARCN1P48444 511 aaKnown RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 USP10Q14694 798 aaKnown RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 PAN2Q504Q3 1202 aaKnown RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 CFAP157Q5JU67 520 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 ANO7Q6IWH7 933 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 ZNF280DQ6N043 979 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 IRGCQ6NXR0 463 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 MSANTD2Q6P1R3 559 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 KIAA0408Q6ZU52 694 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 RAPH1Q70E73 1250 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 SCD5Q86SK9 330 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 ZNF598Q86UK7 904 aaKnown RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 TDRD5Q8NAT2 981 aaKnown RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 ACVR1CQ8NER5 493 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 SPATA22Q8NHS9 363 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 USP33Q8TEY7 942 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 FAM136AQ96C01 138 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 CNDP1Q96KN2 507 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 FCRL2Q96LA5 508 aaPredicted RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 C1orf74Q96LT6 269 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 TMEM209Q96SK2 561 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 FAM167BQ9BTA0 163 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 SLC39A8Q9C0K1 460 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 ILKAPQ9H0C8 392 aaPredicted RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 TASP1Q9H6P5 420 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 TREX1Q9NSU2 369 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 OSER1Q9NX31 292 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 UBP1Q9NZI7 540 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 SLC39A10Q9ULF5 831 aa6.64□□□□□ -1.35
PTPRO-208ENST00000542557 CORO1CQ9ULV4 474 aaPredicted RBP6.64□□□□□ -1.35
PTPRO-208ENST00000542557 E2F8A0AVK6 867 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 MEI4A8MW99 385 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 E9PAM4 449 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 TMEM189-UBE2V1I3L0A0 370 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 MATN2O00339 956 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 HDAC3O15379 428 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 MAP3K7O43318 606 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 DDHD2O94830 711 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 HLA-DQB2P05538 268 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 SBK3P0C264 359 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 ANPEPP15144 967 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 ARNTP27540 789 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 CST5P28325 142 aaPredicted RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 GABRB3P28472 473 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 CTGFP29279 349 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 CRABP2P29373 138 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 ADSLP30566 484 aaPredicted RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 KPNA2P52292 529 aaKnown RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 SESN3P58005 492 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 RAB10P61026 200 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 YWHAHQ04917 246 aaPredicted RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 ASPHQ12797 758 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 PRKAA1Q13131 559 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 VWA5B1Q5TIE3 1220 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 LRRC8EQ6NSJ5 796 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 APLFQ8IW19 511 aaPredicted RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 CENPLQ8N0S6 344 aaPredicted RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 C2CD4AQ8NCU7 369 aaPredicted RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 IPMKQ8NFU5 416 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 PDCD6IPQ8WUM4 868 aaKnown RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 SCG3Q8WXD2 468 aaKnown RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 TRIB2Q92519 343 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 CASP10Q92851 521 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 FUBP3Q96I24 572 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 CLPTM1LQ96KA5 538 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 ADAM2Q99965 735 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 RTKNQ9BST9 563 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 FICDQ9BVA6 458 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 OXCT2Q9BYC2 517 aaPredicted RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 SIK2Q9H0K1 926 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 DONSONQ9NYP3 566 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 VTI1BQ9UEU0 232 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 PCNTO95613 3336 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 A0A087X1B8 175 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 A6NHS1 94 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 TK2O00142 265 aa6.63□□□□□ -1.35
PTPRO-208ENST00000542557 KIF1CO43896 1103 aaKnown RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 MT-CYBP00156 380 aaPredicted RBP6.63□□□□□ -1.35
PTPRO-208ENST00000542557 AHSGP02765 367 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms