RNA–Protein interactions for RNA: ENST00000541774.5

ERBB2-204, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-204ENST00000541774 DENND3A2RUS2 1198 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 PLD2O14939 933 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 RFPL2O75678 378 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 IL1R1P14778 569 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 VEGFAP15692 232 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-204ENST00000541774 HSD17B4P51659 736 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 FXNQ16595 210 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 EFHC2Q5JST6 749 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 CHADLQ6NUI6 762 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 ADGRD1Q6QNK2 874 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 DNAJC14Q6Y2X3 702 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-204ENST00000541774 C7orf31Q8N865 590 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 ELMO2Q96JJ3 720 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 TTYH2Q9BSA4 534 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 TDRD1Q9BXT4 1180 aaKnown RBP11.15□□□□□ -0.62
ERBB2-204ENST00000541774 POLE3Q9NRF9 147 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.15□□□□□ -0.62
ERBB2-204ENST00000541774 DNAJC28Q9NX36 388 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 IFT80Q9P2H3 777 aaPredicted RBP11.15□□□□□ -0.62
ERBB2-204ENST00000541774 C3orf18Q9UK00 162 aa11.15□□□□□ -0.62
ERBB2-204ENST00000541774 PTBP2Q9UKA9 531 aaKnown RBP11.15□□□□□ -0.62
ERBB2-204ENST00000541774 A0A096LPK6 155 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 SDR42E2A6NKP2 422 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 LIASO43766 372 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 PLOD3O60568 738 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 SNRPB2P08579 225 aaKnown RBP11.15□□□□□ -0.63
ERBB2-204ENST00000541774 RAP1GAPP47736 663 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 PPIL2Q13356 520 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 BTG3Q14201 252 aaPredicted RBP11.15□□□□□ -0.63
ERBB2-204ENST00000541774 PRKD1Q15139 912 aaPredicted RBP11.15□□□□□ -0.63
ERBB2-204ENST00000541774 SNRNP35Q16560 246 aaKnown RBP11.15□□□□□ -0.63
ERBB2-204ENST00000541774 EML3Q32P44 896 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 TIMM50Q3ZCQ8 353 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 STRIP1Q5VSL9 837 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 UGT3A1Q6NUS8 523 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 HIPK1Q86Z02 1210 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 C10orf107Q8IVU9 208 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 MICALL2Q8IY33 904 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 ADGRF4Q8IZF3 695 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 UBE2J2Q8N2K1 259 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 ZNF276Q8N554 614 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 VPS37AQ8NEZ2 397 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 ZNF304Q9HCX3 659 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 TBC1D13Q9NVG8 400 aa11.15□□□□□ -0.63
ERBB2-204ENST00000541774 FAM240BA0A1B0GVZ2 78 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 DDTLA6NHG4 134 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 PCSK6P29122 969 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 GRK3P35626 688 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 BNIP2Q12982 314 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 RAB39AQ14964 217 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 PCSK7Q16549 785 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 GPR180Q86V85 440 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 MCOLN2Q8IZK6 566 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 ITFG1Q8TB96 612 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 PRR11Q96HE9 360 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 RBBP8Q99708 897 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 AIFM2Q9BRQ8 373 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 MIR1-1HGQ9H1L0 117 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 LIMD1Q9UGP4 676 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 PLCL2Q9UPR0 1127 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 FNDC3AQ9Y2H6 1198 aaKnown RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 CEPT1Q9Y6K0 416 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 IGSF9BQ9UPX0 1349 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 TRDMT1O14717 391 aaKnown RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 FUCA1P04066 466 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 PSKH1P11801 424 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 TRIM71Q2Q1W2 868 aaKnown RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 CYP20A1Q6UW02 462 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 CHST15Q7LFX5 561 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 GRAMD2AQ8IUY3 354 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 OR6P1Q8NGX9 317 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 MKL1Q969V6 931 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 FRMD8P1Q9BZ68 369 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 TLE6Q9H808 572 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 KRT84Q9NSB2 600 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 UBA2Q9UBT2 640 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 TRMT6Q9UJA5 497 aaKnown RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 MYH7BA7E2Y1 1941 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 RIC1Q4ADV7 1423 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 H3BNH8 94 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 TPP1O14773 563 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 EIF3DO15371 548 aaKnown RBP eCLIP11.14□□□□□ -0.631e-9■□□□□ 8
ERBB2-204ENST00000541774 MT-ND1P03886 318 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 PDGFRAP16234 1089 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 CCT8P50990 548 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 SLC18A1P54219 525 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 SEC23AQ15436 765 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 QRICH1Q2TAL8 776 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 PYDC2Q56P42 97 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 KIAA0408Q6ZU52 694 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 ZNF677Q86XU0 584 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 NAT16Q8N8M0 369 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 Q8N9G6 341 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 SMG8Q8ND04 991 aaKnown RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 JPH3Q8WXH2 748 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 VCPIP1Q96JH7 1222 aa11.14□□□□□ -0.63
ERBB2-204ENST00000541774 INO80BQ9C086 356 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 ZNF395Q9H8N7 513 aaPredicted RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 DDX4Q9NQI0 724 aaKnown RBP11.14□□□□□ -0.63
ERBB2-204ENST00000541774 MTMR4Q9NYA4 1195 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms