RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 PRICKLE1Q96MT3 831 aaPredicted RBP9.69□□□□□ -0.86
CNOT4-212ENST00000541284 TSGA13Q96PP4 275 aa9.69□□□□□ -0.86
CNOT4-212ENST00000541284 FERMT1Q9BQL6 677 aa9.69□□□□□ -0.86
CNOT4-212ENST00000541284 UPF3AQ9H1J1 476 aaKnown RBP9.69□□□□□ -0.86
CNOT4-212ENST00000541284 RHOJQ9H4E5 214 aa9.69□□□□□ -0.86
CNOT4-212ENST00000541284 C20orf96Q9NUD7 363 aaPredicted RBP9.69□□□□□ -0.86
CNOT4-212ENST00000541284 UBP1Q9NZI7 540 aa9.69□□□□□ -0.86
CNOT4-212ENST00000541284 BFARQ9NZS9 450 aa9.69□□□□□ -0.86
CNOT4-212ENST00000541284 Q9Y3F1 56 aa9.69□□□□□ -0.86
CNOT4-212ENST00000541284 IPPQ9Y573 584 aa9.69□□□□□ -0.86
CNOT4-212ENST00000541284 ZNF106Q9H2Y7 1883 aaKnown RBP9.69□□□□□ -0.86
CNOT4-212ENST00000541284 DOCK4Q8N1I0 1966 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 C15orf38-AP3S2A0A0A6YYH1 394 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 SLC22A2O15244 555 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ATP9BO43861 1147 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 CXCR3P49682 368 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 NUDT2P50583 147 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 RPL14P50914 215 aaKnown RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 POLE2P56282 527 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 CDKL1Q00532 357 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ADGRE1Q14246 886 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ANO4Q32M45 955 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 PAXIP1Q6ZW49 1069 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ARPINQ7Z6K5 226 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 SATL1Q86VE3 508 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 RASAL3Q86YV0 1011 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 TNIP3Q96KP6 325 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 GBP5Q96PP8 586 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 OCEL1Q9H607 264 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ZBTB26Q9HCK0 441 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 C6orf203Q9P0P8 240 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 STAP1Q9ULZ2 295 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 SLC4A7Q9Y6M7 1214 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 VILLO15195 856 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 CABYRO75952 493 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 RTN3O95197 1032 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ADRA1AP35348 466 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 MSX2P35548 267 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 MYBPC1Q00872 1141 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 MED21Q13503 144 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 PCBP1Q15365 356 aaKnown RBP eCLIP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 CYHR1Q6ZMK1 362 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 C3orf58Q8NDZ4 430 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 GPRC5AQ8NFJ5 357 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 RP9Q8TA86 221 aaKnown RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 NAT14Q8WUY8 206 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 PPP1R36Q96LQ0 422 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 GCNAQ96QF7 691 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 RTP3Q9BQQ7 232 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 NUF2Q9BZD4 464 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ILKAPQ9H0C8 392 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 TXNDC16Q9P2K2 825 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 TRHDEQ9UKU6 1024 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 SLC39A10Q9ULF5 831 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 MAGED2Q9UNF1 606 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ANKRD6Q9Y2G4 727 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 COPG1Q9Y678 874 aaKnown RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 MYBPHLA2RUH7 354 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 NEMP1O14524 444 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 AIM2O14862 343 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 LRIG2O94898 1065 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 IGLV3-25P01717 112 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 HSPA1AP0DMV8 641 aaKnown RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 HSPA1BP0DMV9 641 aaKnown RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 THRAP10827 490 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ETS2P15036 469 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 AXLP30530 894 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 PPARGP37231 505 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 PSMD8P48556 350 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 CHN2P52757 468 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 NAGLUP54802 743 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 TPI1P60174 286 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 MPP1Q00013 466 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 RFTN1Q14699 578 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 LRRC8EQ6NSJ5 796 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 CHSY3Q70JA7 882 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 FAM35AQ86V20 835 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 SLC41A1Q8IVJ1 513 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 DENND6AQ8IWF6 608 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 TXNDC5Q8NBS9 432 aaKnown RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 OR6J1Q8NGC5 347 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 SPATA22Q8NHS9 363 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 MARK4Q96L34 752 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 ZFP42Q96MM3 310 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 APBA2Q99767 749 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 COLEC11Q9BWP8 271 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 FTHL17Q9BXU8 183 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 RHOBTB2Q9BYZ6 727 aa9.68□□□□□ -0.86
CNOT4-212ENST00000541284 SUDS3Q9H7L9 328 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 DMAP1Q9NPF5 467 aaPredicted RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 PIN4Q9Y237 131 aaKnown RBP9.68□□□□□ -0.86
CNOT4-212ENST00000541284 MAGEB16A2A368 324 aa9.67□□□□□ -0.86
CNOT4-212ENST00000541284 RRN3P2A6NIE6 340 aa9.67□□□□□ -0.86
CNOT4-212ENST00000541284 SDHDO14521 159 aa9.67□□□□□ -0.86
CNOT4-212ENST00000541284 NCAM2O15394 837 aa9.67□□□□□ -0.86
CNOT4-212ENST00000541284 CRTAMO95727 393 aa9.67□□□□□ -0.86
CNOT4-212ENST00000541284 HK2P52789 917 aa9.67□□□□□ -0.86
CNOT4-212ENST00000541284 DGKDQ16760 1214 aa9.67□□□□□ -0.86
CNOT4-212ENST00000541284 CCSAPQ6IQ19 270 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms