RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 CD68P34810 354 aaPredicted RBP9.5□□□□□ -0.89
DDX55-208ENST00000541259 RPL22P35268 128 aaKnown RBP9.5□□□□□ -0.89
DDX55-208ENST00000541259 RGRP47804 291 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 SEC13P55735 322 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 MAXP61244 160 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ECT2LQ008S8 904 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 SLC7A5Q01650 507 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 DR1Q01658 176 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 PFKPQ01813 784 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ZNF33AQ06730 810 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 HNRNPDQ14103 355 aaKnown RBP9.5□□□□□ -0.89
DDX55-208ENST00000541259 LBRQ14739 615 aaKnown RBP9.5□□□□□ -0.89
DDX55-208ENST00000541259 MLF2Q15773 248 aaPredicted RBP9.5□□□□□ -0.89
DDX55-208ENST00000541259 PTPRNQ16849 979 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 TEX44Q53QW1 395 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 DGKKQ5KSL6 1271 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ANKRD20A2Q5SQ80 823 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 TMCO4Q5TGY1 634 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ANKRD20A1Q5TYW2 823 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 MARC1Q5VT66 337 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ANKRD20A3Q5VUR7 823 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 TIGD7Q6NT04 549 aaPredicted RBP9.5□□□□□ -0.89
DDX55-208ENST00000541259 TPRG1Q6ZUI0 275 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 GJD3Q8N144 294 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.5□□□□□ -0.89
DDX55-208ENST00000541259 TEX26Q8N6G2 289 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ATP11CQ8NB49 1132 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 TSEN2Q8NCE0 465 aaKnown RBP9.5□□□□□ -0.89
DDX55-208ENST00000541259 CCDC110Q8TBZ0 833 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 FATE1Q969F0 183 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ACDQ96AP0 544 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 RTP4Q96DX8 246 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 MYO19Q96H55 970 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 TEKT5Q96M29 485 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 AGAP3Q96P47 875 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 TRIM51Q9BSJ1 452 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 MTG2Q9H4K7 406 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 NT5MQ9NPB1 228 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 RBM22Q9NW64 420 aaKnown RBP eCLIP9.5□□□□□ -0.89
DDX55-208ENST00000541259 MUTYHQ9UIF7 546 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 ATP8A1Q9Y2Q0 1164 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 MYLKQ15746 1914 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 VCANP13611 3396 aa9.5□□□□□ -0.89
DDX55-208ENST00000541259 KRBA1A5PL33 1030 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 ZSCAN5CA6NGD5 496 aaPredicted RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 TTC34A8MYJ7 566 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 GCATO75600 419 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 TMCC1O94876 653 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 METTL18O95568 372 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 ECEL1O95672 775 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 DLDP09622 509 aaKnown RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 GLULP15104 373 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 TNFRSF4P43489 277 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 MMP13P45452 471 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 VPS41P49754 854 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 SERPINH1P50454 418 aaKnown RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 RENBPP51606 427 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 TERF1P54274 439 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 LMNB2Q03252 620 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 SULT2A1Q06520 285 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 SLC20A2Q08357 652 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 PTK6Q13882 451 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 IHHQ14623 411 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 DLG2Q15700 870 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 INO80DQ53TQ3 878 aaPredicted RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 TMEM196Q5HYL7 178 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 ATXN7L2Q5T6C5 722 aaPredicted RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 FAXCQ5TGI0 409 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 RETSATQ6NUM9 610 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 BRICD5Q6PL45 260 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 PID1Q7Z2X4 250 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 JAMLQ86YT9 394 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 SH2D3CQ8N5H7 860 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 ZNF366Q8N895 744 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 CCDC26Q8TAB7 109 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 PRR7Q8TB68 274 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 GRK7Q8WTQ7 553 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 NSMCE1Q8WV22 266 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 FAM3CQ92520 227 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 SLCO2A1Q92959 643 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 EXOC2Q96KP1 924 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 NSMCE3Q96MG7 304 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 ZNF599Q96NL3 588 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 ACOX2Q99424 681 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 SPSB2Q99619 263 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 USB1Q9BQ65 265 aaKnown RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 EPC1Q9H2F5 836 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 TNKS2Q9H2K2 1166 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 KLHL8Q9P2G9 620 aaPredicted RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 LHX3Q9UBR4 397 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.49□□□□□ -0.89
DDX55-208ENST00000541259 SLC25A13Q9UJS0 675 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 HS3ST2Q9Y278 367 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 MTF2Q9Y483 593 aaPredicted RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 TTLL3Q9Y4R7 772 aa9.49□□□□□ -0.89
DDX55-208ENST00000541259 V9GYY5 206 aaPredicted RBP9.49□□□□□ -0.89
DDX55-208ENST00000541259 INSIG1O15503 277 aa9.48□□□□□ -0.89
DDX55-208ENST00000541259 MTSS1O43312 755 aa9.48□□□□□ -0.89
DDX55-208ENST00000541259 TIMM44O43615 452 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms