RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 RPS6KA1Q15418 735 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 MEI1Q5TIA1 1274 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 MARC1Q5VT66 337 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 BBS12Q6ZW61 710 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 STK40Q8N2I9 435 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 PSKH2Q96QS6 385 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 FERMT1Q9BQL6 677 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 HEPHQ9BQS7 1158 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 CINPQ9BW66 212 aaPredicted RBP19.09■□□□□ 0.65
VPS33A-205ENST00000541169 CPEB1Q9BZB8 566 aaKnown RBP19.09■□□□□ 0.65
VPS33A-205ENST00000541169 POLR3BQ9NW08 1133 aaPredicted RBP19.09■□□□□ 0.65
VPS33A-205ENST00000541169 DTLQ9NZJ0 730 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 IL36AQ9UHA7 158 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 RAB23Q9ULC3 237 aa19.09■□□□□ 0.65
VPS33A-205ENST00000541169 FCF1Q9Y324 198 aaKnown RBP19.09■□□□□ 0.65
VPS33A-205ENST00000541169 NYNRINQ9P2P1 1898 aaKnown RBP19.09■□□□□ 0.65
VPS33A-205ENST00000541169 MATN3O15232 486 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 SLC7A4O43246 635 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 KIF5CO60282 957 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 ZNF821O75541 412 aaPredicted RBP19.08■□□□□ 0.64
VPS33A-205ENST00000541169 IL1BP01584 269 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 MARCKSL1P49006 195 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 DNA2P51530 1060 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 PPIDQ08752 370 aaKnown RBP19.08■□□□□ 0.64
VPS33A-205ENST00000541169 LBRQ14739 615 aaKnown RBP19.08■□□□□ 0.64
VPS33A-205ENST00000541169 TTC13Q8NBP0 860 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 HCAR2Q8TDS4 363 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 ALG3Q92685 438 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 ZC3H10Q96K80 434 aaKnown RBP19.08■□□□□ 0.64
VPS33A-205ENST00000541169 TUBGCP5Q96RT8 1024 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 OSBPL8Q9BZF1 889 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 EPC1Q9H2F5 836 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 PABPC3Q9H361 631 aaKnown RBP19.08■□□□□ 0.64
VPS33A-205ENST00000541169 DYRK4Q9NR20 520 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 HECAQ9UBI9 543 aaPredicted RBP19.08■□□□□ 0.64
VPS33A-205ENST00000541169 JRKLQ9Y4A0 524 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 HEY1Q9Y5J3 304 aa19.08■□□□□ 0.64
VPS33A-205ENST00000541169 HACD1B0YJ81 288 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 PROB1E7EW31 1015 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 APOC4-APOC2K7ER74 178 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 MAP3K13O43283 966 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 RHOBTB1O94844 696 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 APOC2P02655 101 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 SLC8A1P32418 973 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 DPP6P42658 865 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 PXNP49023 591 aaPredicted RBP19.07■□□□□ 0.64
VPS33A-205ENST00000541169 NUMBP49757 651 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 TPMTP51580 245 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 CCNHP51946 323 aaPredicted RBP19.07■□□□□ 0.64
VPS33A-205ENST00000541169 GBE1Q04446 702 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 XRCC4Q13426 336 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 ZNF235Q14590 738 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 ELF2Q15723 593 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 MYLK3Q32MK0 819 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 MAP7D1Q3KQU3 841 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 CCDC181Q5TID7 509 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 KAZNQ674X7 775 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 DPY19L3Q6ZPD9 716 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 CEP68Q76N32 757 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 MMAAQ8IVH4 418 aaKnown RBP19.07■□□□□ 0.64
VPS33A-205ENST00000541169 CCNYQ8ND76 341 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 OMDQ99983 421 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 TPSD1Q9BZJ3 242 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 CARD9Q9H257 536 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 KDM4CQ9H3R0 1056 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 SGK2Q9HBY8 427 aa19.07■□□□□ 0.64
VPS33A-205ENST00000541169 DDX3YO15523 660 aaKnown RBP19.06■□□□□ 0.64
VPS33A-205ENST00000541169 NEBLO76041 1014 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 VAV1P15498 845 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 CD6P30203 668 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 MMP13P45452 471 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 AP1S1P61966 158 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 DMWDQ09019 674 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 SIM2Q14190 667 aaPredicted RBP19.06■□□□□ 0.64
VPS33A-205ENST00000541169 CYTH1Q15438 398 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 REXO1L1PQ8IX06 675 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 CCDC13Q8IYE1 715 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 TEX26Q8N6G2 289 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 PIP4K2CQ8TBX8 421 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 MAML1Q92585 1016 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 HAUS1Q96CS2 278 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 LOXL4Q96JB6 756 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 ZNF641Q96N77 438 aaPredicted RBP19.06■□□□□ 0.64
VPS33A-205ENST00000541169 OLFM3Q96PB7 478 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 TNKS2Q9H2K2 1166 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 MTG2Q9H4K7 406 aa19.06■□□□□ 0.64
VPS33A-205ENST00000541169 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.05■□□□□ 0.64
VPS33A-205ENST00000541169 A0A1W2PQ67 120 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 HRO43593 1189 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 BNIP3LO60238 219 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 NDUFS2O75306 463 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 PEX11BO96011 259 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 PYGMP11217 842 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 KRT10P13645 584 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 CCNB1P14635 433 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 SUOXP51687 545 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 DYNLT1P63172 113 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 SLC10A2Q12908 348 aaPredicted RBP19.05■□□□□ 0.64
VPS33A-205ENST00000541169 SEL1L2Q5TEA6 688 aa19.05■□□□□ 0.64
VPS33A-205ENST00000541169 LPCAT2Q7L5N7 544 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms