RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 STPG1Q5TH74 334 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 TXNRD3NBQ6F5E7 133 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 NCEH1Q6PIU2 408 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 POLNQ7Z5Q5 900 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 RGL4Q8IZJ4 473 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 NPWQ8N729 165 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 CHST14Q8NCH0 376 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 GANCQ8TET4 914 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 RFFLQ8WZ73 363 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 BIRC7Q96CA5 298 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 ORAI3Q9BRQ5 295 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 TNKS2Q9H2K2 1166 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 IL36AQ9UHA7 158 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 ACTL7AQ9Y615 435 aa13.35□□□□□ -0.27
LTBR-208ENST00000541005 ARID1BQ8NFD5 2236 aaPredicted RBP13.34□□□□□ -0.27
LTBR-208ENST00000541005 ARHGAP42A6NI28 874 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 TM4SF5O14894 197 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 BCAT2O15382 392 aaPredicted RBP13.34□□□□□ -0.27
LTBR-208ENST00000541005 LATO43561 262 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 BUB1O43683 1085 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 PRAMEF11O60813 436 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 TMCC1O94876 653 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 CFIP05156 583 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 ENGP17813 658 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 ITGB7P26010 798 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 CD27P26842 260 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 MAOBP27338 520 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 ARL4AP40617 200 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 CCNHP51946 323 aaPredicted RBP13.34□□□□□ -0.27
LTBR-208ENST00000541005 CNTN1Q12860 1018 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 HADHQ16836 314 aaKnown RBP13.34□□□□□ -0.27
LTBR-208ENST00000541005 ARHGAP12Q8IWW6 846 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 RHOT2Q8IXI1 618 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 ZCCHC9Q8N567 271 aaKnown RBP13.34□□□□□ -0.27
LTBR-208ENST00000541005 LZTR1Q8N653 840 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 OR2AP1Q8NGE2 309 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 VOPP1Q96AW1 172 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 LRIG1Q96JA1 1093 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 CSPG4P5Q96PW8 444 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 PANX2Q96RD6 677 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 HEPHQ9BQS7 1158 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 HDAC8Q9BY41 377 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 PCDH18Q9HCL0 1135 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 TMEM9BQ9NQ34 198 aa13.34□□□□□ -0.27
LTBR-208ENST00000541005 EIF2B4Q9UI10 523 aaKnown RBP13.34□□□□□ -0.27
LTBR-208ENST00000541005 NCOR2Q9Y618 2525 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 ARHGAP33O14559 1287 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 CDX4O14627 284 aaPredicted RBP13.33□□□□□ -0.28
LTBR-208ENST00000541005 DAPK3O43293 454 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 BNIP3LO60238 219 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 LEFTY1O75610 366 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 SYPP08247 313 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 NUDT1P36639 197 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 ARHGAP25P42331 645 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 ARSEP51690 589 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 TAS2R38P59533 333 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 SNRPD1P62314 119 aaKnown RBP13.33□□□□□ -0.28
LTBR-208ENST00000541005 CCDC15Q0P6D6 951 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 ARSIQ5FYB1 569 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.33□□□□□ -0.28
LTBR-208ENST00000541005 TRIM69Q86WT6 500 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 CCDC170Q8IYT3 715 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 OR14C36Q8NHC7 312 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 SLC35G2Q8TBE7 412 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 GRIN3AQ8TCU5 1115 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 HSPH1Q92598 858 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 ARRDC3Q96B67 414 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 PPP1R16AQ96I34 528 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 GDAP1L1Q96MZ0 367 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 TM6SF2Q9BZW4 377 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 ZDHHC5Q9C0B5 715 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 SLC39A8Q9C0K1 460 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 PREBQ9HCU5 417 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 HECAQ9UBI9 543 aaPredicted RBP13.33□□□□□ -0.28
LTBR-208ENST00000541005 LHX3Q9UBR4 397 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 UBA2Q9UBT2 640 aaPredicted RBP13.33□□□□□ -0.28
LTBR-208ENST00000541005 MFHAS1Q9Y4C4 1052 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 TDRD6O60522 2096 aaKnown RBP13.33□□□□□ -0.28
LTBR-208ENST00000541005 DNAH14Q0VDD8 3507 aa13.33□□□□□ -0.28
LTBR-208ENST00000541005 A0A1W2PPC4 97 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 RNF103O00237 685 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 PLK4O00444 970 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 KPNA3O00505 521 aaPredicted RBP13.32□□□□□ -0.28
LTBR-208ENST00000541005 FSBPO95073 299 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 POP4O95707 220 aaKnown RBP13.32□□□□□ -0.28
LTBR-208ENST00000541005 KRT7P08729 469 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 IL4RP24394 825 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 CDC25BP30305 580 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 GRIA4P48058 902 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 PAPOLAP51003 745 aaKnown RBP13.32□□□□□ -0.28
LTBR-208ENST00000541005 AFF3P51826 1226 aaKnown RBP13.32□□□□□ -0.28
LTBR-208ENST00000541005 HADHBP55084 474 aaKnown RBP13.32□□□□□ -0.28
LTBR-208ENST00000541005 TAS2R40P59535 323 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 NEK5Q6P3R8 708 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 TMCO3Q6UWJ1 677 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 ERN2Q76MJ5 926 aaKnown RBP13.32□□□□□ -0.28
LTBR-208ENST00000541005 ERMP1Q7Z2K6 904 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 ZNF354CQ86Y25 554 aa13.32□□□□□ -0.28
LTBR-208ENST00000541005 CPNE8Q86YQ8 564 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms