RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 PEX11BO96011 259 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 GSRP00390 522 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 SLC8A1P32418 973 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 CNR2P34972 360 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 RAD51Q06609 339 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 ZNF33AQ06730 810 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 NSUN2Q08J23 767 aaKnown RBP eCLIP15.75■□□□□ 0.11
DDB1-218ENST00000540784 SLC10A7Q0GE19 358 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 AP1B1Q10567 949 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 SFSWAPQ12872 951 aaKnown RBP15.75■□□□□ 0.11
DDB1-218ENST00000540784 HNRNPDQ14103 355 aaKnown RBP15.75■□□□□ 0.11
DDB1-218ENST00000540784 CST6Q15828 149 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 ARSIQ5FYB1 569 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 SEL1L2Q5TEA6 688 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 FAM46CQ5VWP2 391 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 CCDC13Q8IYE1 715 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 CHST14Q8NCH0 376 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 ZBTB44Q8NCP5 570 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 TMIEQ8NEW7 156 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 OR2AP1Q8NGE2 309 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 GANCQ8TET4 914 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 LRRN4Q8WUT4 740 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 ATOH1Q92858 354 aaPredicted RBP15.75■□□□□ 0.11
DDB1-218ENST00000540784 FATE1Q969F0 183 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 HDAC11Q96DB2 347 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 LGMNQ99538 433 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 HEPHQ9BQS7 1158 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 TLR10Q9BXR5 811 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 IL36AQ9UHA7 158 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 PPM1HQ9ULR3 514 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 SCML1Q9UN30 329 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 INVSQ9Y283 1065 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 NCKAP1Q9Y2A7 1128 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 CACNA1IQ9P0X4 2223 aa15.75■□□□□ 0.11
DDB1-218ENST00000540784 NUP205Q92621 2012 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 C1QTNF3-AMACRE9PGA6 284 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 KRIT1O00522 736 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 ENC1O14682 589 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 HRO43593 1189 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 IGSF6O95976 241 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 ADH1BP00325 375 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 PRNPP04156 253 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 C7P10643 843 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 CCNB1P14635 433 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 PECAM1P16284 738 aaPredicted RBP15.74■□□□□ 0.11
DDB1-218ENST00000540784 C5AR1P21730 350 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 CCNHP51946 323 aaPredicted RBP15.74■□□□□ 0.11
DDB1-218ENST00000540784 PPIDQ08752 370 aaKnown RBP15.74■□□□□ 0.11
DDB1-218ENST00000540784 ZNF235Q14590 738 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 ATXN7L2Q5T6C5 722 aaPredicted RBP15.74■□□□□ 0.11
DDB1-218ENST00000540784 DCAF12L1Q5VU92 463 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 CACUL1Q86Y37 369 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 SLC35F6Q8N357 371 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 TSEN2Q8NCE0 465 aaKnown RBP15.74■□□□□ 0.11
DDB1-218ENST00000540784 PIP4K2CQ8TBX8 421 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 HAUS1Q96CS2 278 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 GDAP1L1Q96MZ0 367 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 OLFM3Q96PB7 478 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 PSKH2Q96QS6 385 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 HERPUD2Q9BSE4 406 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 CARD9Q9H257 536 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 KCND1Q9NSA2 647 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 LHX3Q9UBR4 397 aa15.74■□□□□ 0.11
DDB1-218ENST00000540784 APOC4-APOC2K7ER74 178 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 MID1O15344 667 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 MAP3K13O43283 966 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 RPP40O75818 363 aaKnown RBP15.73■□□□□ 0.11
DDB1-218ENST00000540784 NEBLO76041 1014 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 APOC2P02655 101 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 OXTRP30559 389 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 HSPA9P38646 679 aaKnown RBP15.73■□□□□ 0.11
DDB1-218ENST00000540784 MMP13P45452 471 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 PSMD8P48556 350 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 CSNK1DP48730 415 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 TPMTP51580 245 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 GNG11P61952 73 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 XRCC4Q13426 336 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 TTC31Q49AM3 519 aaPredicted RBP15.73■□□□□ 0.11
DDB1-218ENST00000540784 ZC3H14Q6PJT7 736 aaKnown RBP15.73■□□□□ 0.11
DDB1-218ENST00000540784 SRLQ86TD4 932 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 HDDC3Q8N4P3 179 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 TEX26Q8N6G2 289 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 TTC13Q8NBP0 860 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 OR6K2Q8NGY2 324 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 TFB1MQ8WVM0 346 aaKnown RBP15.73■□□□□ 0.11
DDB1-218ENST00000540784 GAB3Q8WWW8 586 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 RLN3Q8WXF3 142 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 MAML1Q92585 1016 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 TRIM44Q96DX7 344 aaPredicted RBP15.73■□□□□ 0.11
DDB1-218ENST00000540784 LRIG1Q96JA1 1093 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 OMDQ99983 421 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 PABPC3Q9H361 631 aaKnown RBP15.73■□□□□ 0.11
DDB1-218ENST00000540784 HAUS2Q9NVX0 235 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 RBM22Q9NW64 420 aaKnown RBP eCLIP15.73■□□□□ 0.11
DDB1-218ENST00000540784 FBXL12Q9NXK8 326 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 EVLQ9UI08 416 aaPredicted RBP15.73■□□□□ 0.11
DDB1-218ENST00000540784 SARDHQ9UL12 918 aa15.73■□□□□ 0.11
DDB1-218ENST00000540784 HACD1B0YJ81 288 aa15.72■□□□□ 0.11
DDB1-218ENST00000540784 H7C0C1 242 aa15.72■□□□□ 0.11
DDB1-218ENST00000540784 KPNA3O00505 521 aaPredicted RBP15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms