RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 DNMT3BQ9UBC3 853 aaKnown RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 YBX2Q9Y2T7 364 aaKnown RBP17.16■□□□□ 0.34
COPS3-212ENST00000539941 TTLL3Q9Y4R7 772 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 ACTL7BQ9Y614 415 aa17.16■□□□□ 0.34
COPS3-212ENST00000539941 CHD9Q3L8U1 2897 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 MAGEB16A2A368 324 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 KDELR3O43731 214 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 TSPAN3O60637 253 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 RHOP08100 348 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 MGAT1P26572 445 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 HOXD9P28356 352 aaPredicted RBP17.15■□□□□ 0.34
COPS3-212ENST00000539941 HPDP32754 393 aaPredicted RBP17.15■□□□□ 0.34
COPS3-212ENST00000539941 PBX2P40425 430 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 CCR2P41597 374 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 SGSHP51688 502 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 SESN2P58004 480 aaPredicted RBP17.15■□□□□ 0.34
COPS3-212ENST00000539941 SLC10A7Q0GE19 358 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 RFTN1Q14699 578 aaPredicted RBP17.15■□□□□ 0.34
COPS3-212ENST00000539941 MPP7Q5T2T1 576 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 GPR158Q5T848 1215 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 ZNF449Q6P9G9 518 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 ADGRD1Q6QNK2 874 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 CCDC117Q8IWD4 279 aaPredicted RBP17.15■□□□□ 0.34
COPS3-212ENST00000539941 BBS5Q8N3I7 341 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 DNAAF3Q8N9W5 541 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 ARNTL2Q8WYA1 636 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 TMA16Q96EY4 203 aaKnown RBP17.15■□□□□ 0.34
COPS3-212ENST00000539941 IMP4Q96G21 291 aaKnown RBP17.15■□□□□ 0.34
COPS3-212ENST00000539941 TBL1YQ9BQ87 522 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 PRKD2Q9BZL6 878 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 IL22Q9GZX6 179 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 NT5MQ9NPB1 228 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 HCFC1R1Q9NWW0 138 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 SENP1Q9P0U3 644 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 SAMD15Q9P1V8 674 aa17.15■□□□□ 0.34
COPS3-212ENST00000539941 E2F8A0AVK6 867 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 RASSF9O75901 435 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 GJA1P17302 382 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 MSH2P43246 934 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 OXCT1P55809 520 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 RAB30Q15771 203 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 SKIDA1Q1XH10 827 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 CASC4Q6P4E1 433 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 CMTM8Q8IZV2 173 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 PAFAH2Q99487 392 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 ACE2Q9BYF1 805 aaPredicted RBP17.14■□□□□ 0.33
COPS3-212ENST00000539941 PBX4Q9BYU1 374 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 PLAC1Q9HBJ0 212 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 SYBUQ9NX95 663 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 CTNNAL1Q9UBT7 734 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 HCFC2Q9Y5Z7 792 aa17.14■□□□□ 0.33
COPS3-212ENST00000539941 TMEM265A0A087WTH1 108 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 A0A0D9SEW6 157 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 LEFTY2O00292 366 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 ZNF197O14709 1029 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 TBL1XO60907 577 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 MOSPD3O75425 235 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 ALDH1A2O94788 518 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 LUC7L3O95232 432 aaKnown RBP17.13■□□□□ 0.33
COPS3-212ENST00000539941 PAPLNO95428 1278 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 C1QAP02745 245 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 ADRA1AP35348 466 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 AVPR1AP37288 418 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 FRG1Q14331 258 aaKnown RBP17.13■□□□□ 0.33
COPS3-212ENST00000539941 TMED2Q15363 201 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 SPANXN3Q5MJ09 141 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 STXBP5Q5T5C0 1151 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 IL31Q6EBC2 164 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 ALG1LQ6GMV1 187 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 CXorf57Q6NSI4 855 aaKnown RBP17.13■□□□□ 0.33
COPS3-212ENST00000539941 EXOC3L1Q86VI1 746 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 OR7D4Q8NG98 312 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 SPATA22Q8NHS9 363 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 SLC44A1Q8WWI5 657 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 TTC17Q96AE7 1141 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 POLR1EQ9GZS1 481 aaKnown RBP17.13■□□□□ 0.33
COPS3-212ENST00000539941 MSRAQ9UJ68 235 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 IKBKGQ9Y6K9 419 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 EYSQ5T1H1 3165 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 NRG2O14511 850 aaPredicted RBP17.13■□□□□ 0.33
COPS3-212ENST00000539941 USP12O75317 370 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 MT-CYBP00156 380 aaPredicted RBP17.13■□□□□ 0.33
COPS3-212ENST00000539941 POLBP06746 335 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 NAB1Q13506 487 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 ZNF235Q14590 738 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 TEAD2Q15562 447 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 SLC14A2Q15849 920 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 KBTBD12Q3ZCT8 623 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 MPPE1Q53F39 396 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 PRSS36Q5K4E3 855 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 KDELC1Q6UW63 502 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 LRRC6Q86X45 466 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 TDRD5Q8NAT2 981 aaKnown RBP17.13■□□□□ 0.33
COPS3-212ENST00000539941 IPMKQ8NFU5 416 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 OR52K2Q8NGK3 314 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 TADA1Q96BN2 335 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 TCEAL4Q96EI5 215 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 FSD1LQ9BXM9 530 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 EPN3Q9H201 632 aa17.13■□□□□ 0.33
COPS3-212ENST00000539941 ATP13A1Q9HD20 1204 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms