RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 HARS2P49590 506 aaKnown RBP17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZNF33AQ06730 810 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 CTC1Q2NKJ3 1217 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 SLC22A12Q96S37 553 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZNF212Q9UDV6 495 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 TRHDEQ9UKU6 1024 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ANAPC1Q9H1A4 1944 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 CHD9Q3L8U1 2897 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ARHGAP42A6NI28 874 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 STC2O76061 302 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 F11P03951 625 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 TROVE2P10155 538 aaKnown RBP eCLIP17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 IRF1P10914 325 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ATP6V1C1P21283 382 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 PHBP35232 272 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 PTDSS1P48651 473 aaKnown RBP17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 CDK16Q00536 496 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 CMPK2Q5EBM0 449 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 SLC30A9Q6PML9 568 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 OTOP3Q7RTS5 596 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 LGI2Q8N0V4 545 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 VAT1Q99536 393 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 C17orf80Q9BSJ5 609 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 GBA3Q9H227 469 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 IL21Q9HBE4 155 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 PLAC1Q9HBJ0 212 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 XAB2Q9HCS7 855 aaKnown RBP17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ENTPD7Q9NQZ7 604 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 EIF2B3Q9NR50 452 aaKnown RBP17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZC3H7BQ9UGR2 993 aaKnown RBP17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 MAFFQ9ULX9 164 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 NUMBLQ9Y6R0 609 aa17.37■□□□□ 0.37
PCDHB17P-201ENST00000539533 CDH23Q9H251 3354 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 WDR91A4D1P6 747 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 TRDMT1O14717 391 aaKnown RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 MATN3O15232 486 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 HNRNPCL1O60812 293 aaKnown RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 USP12O75317 370 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 ZNF189O75820 626 aaPredicted RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 MYOGP15173 224 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 NUMBP49757 651 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 CRADDP78560 199 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 PLPP4Q5VZY2 271 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 ANO7Q6IWH7 933 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 PHOSPHO2Q8TCD6 241 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 HMCESQ96FZ2 354 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 TSC22D3Q99576 134 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 MLPHQ9BV36 600 aaPredicted RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 TRPC7Q9HCX4 862 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 SMPD4Q9NXE4 827 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 UBP1Q9NZI7 540 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 UXTQ9UBK9 157 aaPredicted RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 FETUBQ9UGM5 382 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 IPO11Q9UI26 975 aaKnown RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 MAD1L1Q9Y6D9 718 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 TCRBV9S1A1TA0A576 114 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 ARHGEF15O94989 841 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 CORO1AP31146 461 aaKnown RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 NDST2P52849 883 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 SESN2P58004 480 aaPredicted RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 SEPT7Q16181 437 aaKnown RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 TXNDC8Q6A555 127 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 LRRC8BQ6P9F7 803 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 MIPEPQ99797 713 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 KLF16Q9BXK1 252 aaPredicted RBP17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 ACSS3Q9H6R3 686 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 DCTN4Q9UJW0 460 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 TTLL3Q9Y4R7 772 aa17.36■□□□□ 0.37
PCDHB17P-201ENST00000539533 F5H5T6 163 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 J3KR12 359 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 SMIM24O75264 130 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 ADH1AP07327 375 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 PPP3CCP48454 512 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 ITIH5Q86UX2 942 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 HS6ST3Q8IZP7 471 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 RFWD2Q8NHY2 731 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 SPPL3Q8TCT6 385 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 POF1BQ8WVV4 589 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 IL12RB2Q99665 862 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 DCLRE1BQ9H816 532 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 LINC01553A4QN01 128 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 SCAMP3O14828 347 aaKnown RBP17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 LMNAP02545 664 aaKnown RBP17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 C8AP07357 584 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 OR1E1P30953 314 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 SLC11A2P49281 568 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 MXRA7P84157 204 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 OVGP1Q12889 678 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 ITPRIPL1Q6GPH6 555 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 ADGRD1Q6QNK2 874 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 LMNTD2Q8IXW0 634 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 KREMEN2Q8NCW0 462 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 TCP10LQ8TDR4 215 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 PLD4Q96BZ4 506 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 LRRC39Q96DD0 335 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 PAFAH2Q99487 392 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 EBNA1BP2Q99848 306 aaKnown RBP17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 DHRS4Q9BTZ2 278 aa17.35■□□□□ 0.37
PCDHB17P-201ENST00000539533 C2orf71A6NGG8 1288 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms