RNA–Protein interactions for RNA: ENST00000538828.1

CLTCL1-205, Transcript of clathrin heavy chain like 1, human

TSL 5

Gene CLTCL1, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLTCL1-205	ENST00000538828	DCDC2B	A2VCK2	349 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ARHGAP42	A6NI28	874 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RASA4B	C9J798	803 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	EEF2K	O00418	725 aa	Known RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RASA4	O43374	803 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CREB3	O43889	395 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	FSBP	O95073	299 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CTSL	P07711	333 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ADRB1	P08588	477 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	GLDC	P23378	1020 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	MAOB	P27338	520 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	EIF4A3	P38919	411 aa	Known RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SUOX	P51687	545 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RAD51	Q06609	339 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CNTN1	Q12860	1018 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RFTN1	Q14699	578 aa	Predicted RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SLC45A4	Q5BKX6	768 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PPM1J	Q5JR12	505 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PIP5KL1	Q5T9C9	394 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	LINGO4	Q6UY18	593 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	RFX8	Q6ZV50	586 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ERN2	Q76MJ5	926 aa	Known RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	PRPF39	Q86UA1	669 aa	Known RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	LRRC49	Q8IUZ0	686 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	FAM71B	Q8TC56	605 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ARHGEF26	Q96DR7	871 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	MAGEB5	Q9BZ81	275 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	CPEB1	Q9BZB8	566 aa	Known RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TRIM7	Q9C029	511 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	MIR1-1HG	Q9H1L0	117 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	SLC32A1	Q9H598	525 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	DHX35	Q9H5Z1	703 aa	Known RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	ABHD10	Q9NUJ1	306 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	INTU	Q9ULD6	942 aa		12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TPR	P12270	2363 aa	Known RBP	12.53	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TRPM6	Q9BX84	2022 aa		12.52	□□□□□ -0.4
CLTCL1-205	ENST00000538828	TBC1D3D	A0A087WVF3	549 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3I	A0A087WXS9	549 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3E	A0A087X179	549 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3K	A0A087X1G2	549 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3F	A6NER0	549 aa	Predicted RBP	12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3L	B9A6J9	549 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828		H3BRJ5	948 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	YKT6	O15498	198 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MFAP3L	O75121	409 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	LEFTY1	O75610	366 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KCNK5	O95279	499 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3H	P0C7X1	549 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ERCC2	P18074	760 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MAN1A1	P33908	653 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ARL4A	P40617	200 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CSNK1D	P48730	415 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CCNH	P51946	323 aa	Predicted RBP	12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NEK3	P51956	506 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBX2	Q13207	712 aa	Predicted RBP	12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TCEAL1	Q15170	157 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	HADH	Q16836	314 aa	Known RBP	12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3G	Q6DHY5	549 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3C	Q6IPX1	549 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NAPEPLD	Q6IQ20	393 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	OXR1	Q8N573	874 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MFSD2A	Q8NA29	543 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ASB12	Q8WXK4	309 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	GDAP1L1	Q96MZ0	367 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PEBP4	Q96S96	227 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KCTD15	Q96SI1	283 aa	Predicted RBP	12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NUP85	Q9BW27	656 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KLC2	Q9H0B6	622 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ERVMER34-1	Q9H9K5	563 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PDF	Q9HBH1	243 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MYO1A	Q9UBC5	1043 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DKK3	Q9UBP4	350 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ANAPC7	Q9UJX3	599 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ADAMTS9	Q9P2N4	1935 aa		12.52	□□□□□ -0.41
CLTCL1-205	ENST00000538828		A0A1W2PR77	199 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PRAMEF26	H0Y7S4	382 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	KPNA3	O00505	521 aa	Predicted RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DAPK3	O43293	454 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	BUB1	O43683	1085 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PCDHGA12	O60330	932 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	PRAMEF11	O60813	436 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MTA2	O94776	668 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TMCC1	O94876	653 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	IGSF6	O95976	241 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TMEM253	P0C7T8	217 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	IL1R2	P27930	398 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	CD38	P28907	300 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MAPK8	P45983	427 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	TAS2R38	P59533	333 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SLC25A11	Q02978	314 aa	Known RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	NSUN2	Q08J23	767 aa	Known RBP eCLIP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	DPYS	Q14117	519 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SUZ12	Q15022	739 aa	Known RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF423	Q2M1K9	1284 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	MYLK3	Q32MK0	819 aa		12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	SETMAR	Q53H47	684 aa	Predicted RBP	12.51	□□□□□ -0.41
CLTCL1-205	ENST00000538828	ZNF805	Q5CZA5	627 aa		12.51	□□□□□ -0.41

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