RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 TPX2Q9ULW0 747 aaKnown RBP14.39□□□□□ -0.11
CD4-208ENST00000538827 NFU1Q9UMS0 254 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 OR51B4Q9Y5P0 310 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 DCHS1Q96JQ0 3298 aa14.39□□□□□ -0.11
CD4-208ENST00000538827 OTOL1A6NHN0 477 aaPredicted RBP14.38□□□□□ -0.11
CD4-208ENST00000538827 NDC80O14777 642 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 TMCC1O94876 653 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 PEX11BO96011 259 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 ASGR2P07307 311 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 POLR2EP19388 210 aaKnown RBP14.38□□□□□ -0.11
CD4-208ENST00000538827 CTSOP43234 321 aaPredicted RBP14.38□□□□□ -0.11
CD4-208ENST00000538827 SLC6A11P48066 632 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 PLTPP55058 493 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 GEMIN4P57678 1058 aaKnown RBP14.38□□□□□ -0.11
CD4-208ENST00000538827 SIGLEC14Q08ET2 396 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 HNRNPDQ14103 355 aaKnown RBP14.38□□□□□ -0.11
CD4-208ENST00000538827 PRPSAP1Q14558 356 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 GEN1Q17RS7 908 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 GAB4Q2WGN9 574 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 MBLAC2Q68D91 279 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 ASCL5Q7RTU5 278 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 PCGF5Q86SE9 256 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 PPIL6Q8IXY8 311 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 FATE1Q969F0 183 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 ZNF419Q96HQ0 510 aaPredicted RBP14.38□□□□□ -0.11
CD4-208ENST00000538827 EXOC2Q96KP1 924 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 LMLNQ96KR4 655 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 TEKT5Q96M29 485 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 CIPCQ9C0C6 399 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 NEUROG2Q9H2A3 272 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 ETNK1Q9HBU6 452 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 GLOD4Q9HC38 313 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 IGSF9Q9P2J2 1179 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 DEC1Q9P2X7 70 aa14.38□□□□□ -0.11
CD4-208ENST00000538827 FCF1Q9Y324 198 aaKnown RBP14.38□□□□□ -0.11
CD4-208ENST00000538827 ANKRD36A6QL64 1941 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.37□□□□□ -0.11
CD4-208ENST00000538827 PRR23AA6NEV1 266 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 BHMG1C9JSJ3 638 aaPredicted RBP14.37□□□□□ -0.11
CD4-208ENST00000538827 ZMPSTE24O75844 475 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 ITIH2P19823 946 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 TNFRSF8P28908 595 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 CD68P34810 354 aaPredicted RBP14.37□□□□□ -0.11
CD4-208ENST00000538827 GJA4P35212 333 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 SOX9P48436 509 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 STK19P49842 368 aaPredicted RBP14.37□□□□□ -0.11
CD4-208ENST00000538827 PLK1P53350 603 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 RHOAP61586 193 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 DSC2Q02487 901 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 DMC1Q14565 340 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 RFTN1Q14699 578 aaPredicted RBP14.37□□□□□ -0.11
CD4-208ENST00000538827 PARP6Q2NL67 630 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 RNASEH2BQ5TBB1 312 aaKnown RBP14.37□□□□□ -0.11
CD4-208ENST00000538827 ANKRD22Q5VYY1 191 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 NAIF1Q69YI7 327 aaPredicted RBP14.37□□□□□ -0.11
CD4-208ENST00000538827 WDR93Q6P2C0 686 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 ZDHHC24Q6UX98 284 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 ETFBKMTQ8IXQ9 262 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 CNTD1Q8N815 330 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.37□□□□□ -0.11
CD4-208ENST00000538827 ATP11CQ8NB49 1132 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 SEC14L1Q92503 715 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 CPT1BQ92523 772 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 ACDQ96AP0 544 aa14.37□□□□□ -0.11
CD4-208ENST00000538827 MTRF1LQ9UGC7 380 aaKnown RBP14.37□□□□□ -0.11
CD4-208ENST00000538827 MYO15AQ9UKN7 3530 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 TTC24A2A3L6 582 aaPredicted RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 GOLGA6CA6NDK9 693 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 GOLGA6BA6NDN3 693 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 H0Y858 1186 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 GOLGA8MH3BSY2 632 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 ERLIN1O75477 346 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 TMEM63AO94886 807 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 TUBBP07437 444 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 APRTP07741 180 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 GOLGA6DP0CG33 693 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 MYBL2P10244 700 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 IVDP26440 423 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 OPRD1P41143 372 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 NBL1P41271 181 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 SERPINH1P50454 418 aaKnown RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 SEMA5AQ13591 1074 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 KCNJ11Q14654 390 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 MORF4L2Q15014 288 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 CYTH1Q15438 398 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 HIBCHQ6NVY1 386 aaPredicted RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 CCDC25Q86WR0 208 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 PGBD5Q8N414 524 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 TEX26Q8N6G2 289 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 FBXO25Q8TCJ0 367 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 CYB5D2Q8WUJ1 264 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 SORCS1Q8WY21 1168 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 PRCCQ92733 491 aaPredicted RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 EXOC4Q96A65 974 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 RPL10LQ96L21 214 aaKnown RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 FMO2Q99518 471 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 TM6SF2Q9BZW4 377 aa14.36□□□□□ -0.11
CD4-208ENST00000538827 POLR1EQ9GZS1 481 aaKnown RBP14.36□□□□□ -0.11
CD4-208ENST00000538827 KCNK12Q9HB15 430 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms