RNA–Protein interactions for RNA: ENST00000538145.5

RHBDL3-204, Transcript of rhomboid like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RHBDL3, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3-204ENST00000538145 PTPN7P35236 360 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 RECQLP46063 649 aaPredicted RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 TPMTP51580 245 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 SNRPD1P62314 119 aaKnown RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 SLC10A2Q12908 348 aaPredicted RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 TFDP2Q14188 446 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 TMCO4Q5TGY1 634 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 USP30Q70CQ3 517 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 ATPAF2Q8N5M1 289 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 TMIEQ8NEW7 156 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 RLN3Q8WXF3 142 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 ALG3Q92685 438 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 CD93Q9NPY3 652 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 LHX3Q9UBR4 397 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 NUMA1Q14980 2115 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 THADAQ6YHU6 1953 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 DDX3YO15523 660 aaKnown RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 FTCDO95954 541 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 CTSLP07711 333 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 OXTRP30559 389 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 CHRNA3P32297 505 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 SLC8A1P32418 973 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 CCNHP51946 323 aaPredicted RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 SFSWAPQ12872 951 aaKnown RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 SIM2Q14190 667 aaPredicted RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 TTC31Q49AM3 519 aaPredicted RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 FAM46CQ5VWP2 391 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 SLC36A4Q6YBV0 504 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 RFX6Q8HWS3 928 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 SUMF1Q8NBK3 374 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 CHST14Q8NCH0 376 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 HDAC11Q96DB2 347 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 LRIG1Q96JA1 1093 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 PSKH2Q96QS6 385 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 TM6SF2Q9BZW4 377 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 MBD1Q9UIS9 605 aaPredicted RBP22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 SARDHQ9UL12 918 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 WASF2Q9Y6W5 498 aa22.31■■□□□ 1.16
RHBDL3-204ENST00000538145 C1QTNF3-AMACRE9PGA6 284 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 IL1BP01584 269 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 PRNPP04156 253 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 KRT10P13645 584 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 NR2C2P49116 596 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 RHOAP61586 193 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 ZNF33AQ06730 810 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 PLK5Q496M5 336 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 KBTBD6Q86V97 674 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 CACUL1Q86Y37 369 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 UBL4BQ8N7F7 174 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 FRMD1Q8N878 549 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 PIP4K2CQ8TBX8 421 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 MAML1Q92585 1016 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 GDAP1L1Q96MZ0 367 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 OLFM3Q96PB7 478 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 HEPHQ9BQS7 1158 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 WSB2Q9NYS7 404 aaPredicted RBP22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 IL36AQ9UHA7 158 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 FZD4Q9ULV1 537 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 CYP8B1Q9UNU6 501 aa22.3■■□□□ 1.16
RHBDL3-204ENST00000538145 GPR179Q6PRD1 2367 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 SDK1Q7Z5N4 2213 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 MID1O15344 667 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 BNIP3LO60238 219 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 CST8O60676 142 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 BCKDHBP21953 392 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 TGM2P21980 687 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 CCNCP24863 283 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 CD6P30203 668 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 PSMD8P48556 350 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 CSNK1DP48730 415 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 ADCY2Q08462 1091 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 NSUN2Q08J23 767 aaKnown RBP eCLIP22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 SLC10A7Q0GE19 358 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 LBRQ14739 615 aaKnown RBP22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 SPDYCQ5MJ68 293 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 TIGD7Q6NT04 549 aaPredicted RBP22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 BBS12Q6ZW61 710 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 CCDC50Q8IVM0 306 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 FAM160A2Q8N612 972 aaPredicted RBP22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 TEX26Q8N6G2 289 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 TRIM58Q8NG06 486 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 ALS2CR12Q96Q35 445 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 DUSP15Q9H1R2 295 aaPredicted RBP22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 SEPT3Q9UH03 358 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 PACSIN2Q9UNF0 486 aaPredicted RBP22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 INVSQ9Y283 1065 aa22.29■■□□□ 1.16
RHBDL3-204ENST00000538145 OTOGLQ3ZCN5 2332 aa22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 PTPRZ1P23471 2315 aaPredicted RBP22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 TNRC6BQ9UPQ9 1833 aaKnown RBP22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 ZSCAN12O43309 604 aa22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 POP4O95707 220 aaKnown RBP22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 IGSF6O95976 241 aa22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 DRD3P35462 400 aa22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 DNA2P51530 1060 aa22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 PPIDQ08752 370 aaKnown RBP22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 HNRNPDQ14103 355 aaKnown RBP22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 MYLK3Q32MK0 819 aa22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 PMS2CLQ68D20 193 aa22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 CEP68Q76N32 757 aa22.28■■□□□ 1.16
RHBDL3-204ENST00000538145 BZW1Q7L1Q6 419 aaKnown RBP22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms