RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 SORCS3Q9UPU3 1222 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 PKP3Q9Y446 797 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 TADA3O75528 432 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 F11P03951 625 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 CYP17A1P05093 508 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 RPL10P27635 214 aaKnown RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 GPR1P46091 355 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 ARL4DP49703 201 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 HSPA14Q0VDF9 509 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 PRKG2Q13237 762 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 SMAD4Q13485 552 aaKnown RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 ZNF284Q2VY69 593 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 IZUMO3Q5VZ72 239 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 CD300LGQ6UXG3 332 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 C11orf96Q7Z7L8 435 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 SCAMP4Q969E2 229 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 ZNF707Q96C28 371 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 HSPA12BQ96MM6 686 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 LRRC3BQ96PB8 259 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 DDX23Q9BUQ8 820 aaKnown RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 SLC4A5Q9BY07 1137 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 LMAN2LQ9H0V9 348 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 VPS11Q9H270 941 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 VPS51Q9UID3 782 aa7.36□□□□□ -1.23
MSH6-209ENST00000538136 ANKRD11Q6UB99 2663 aaPredicted RBP7.36□□□□□ -1.23
MSH6-209ENST00000538136 A8MU76 341 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A9O60656 530 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 TMCC1O94876 653 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 ABLIM3O94929 683 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 AGTP01019 485 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A6P19224 532 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A1P22309 533 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A4P22310 534 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 SERPINA4P29622 427 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 HLA-FP30511 346 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A3P35503 534 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A5P35504 534 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 LTBRP36941 435 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 RENBPP51606 427 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 ADCY2Q08462 1091 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 DMC1Q14565 340 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 INSCQ1MX18 579 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 PLEKHG6Q3KR16 790 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 PTRHD1Q6GMV3 140 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 SLC30A9Q6PML9 568 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 DSG4Q86SJ6 1040 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 GPR161Q8N6U8 529 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 SPDYE1Q8NFV5 336 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 OR52K1Q8NGK4 314 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 PIP4K2CQ8TBX8 421 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 PEBP4Q96S96 227 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 CDCA3Q99618 268 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 SLC13A1Q9BZW2 595 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 LHX5Q9H2C1 402 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A7Q9HAW7 530 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A10Q9HAW8 530 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 UGT1A8Q9HAW9 530 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 A0A1W2PQJ5 194 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 IQCF5A8MTL0 148 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 SIN3BO75182 1162 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 RASSF9O75901 435 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 SLU7O95391 586 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 CYP11A1P05108 521 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 DLDP09622 509 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 UNGP13051 313 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 CSNK1EP49674 416 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 C21orf59P57076 290 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 ZNF648Q5T619 568 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 KIAA1211LQ6NV74 962 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 SLC13A5Q86YT5 568 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 ADGRG2Q8IZP9 1017 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 ZCCHC9Q8N567 271 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 OR10G6Q8NH81 332 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 MYEOVQ96EZ4 313 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 THOC1Q96FV9 657 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 SERAC1Q96JX3 654 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 EGFL8Q99944 293 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 BTBD1Q9H0C5 482 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 CD320Q9NPF0 282 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 DDX56Q9NY93 547 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 SEPT3Q9UH03 358 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 RUVBL2Q9Y230 463 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 REXO2Q9Y3B8 237 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 STON1Q9Y6Q2 735 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 RPS6KL1Q9Y6S9 549 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 SCN10AQ9Y5Y9 1956 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 PTPN13Q12923 2485 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 ROS1P08922 2347 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 LAMB1P07942 1786 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 MIF4GDA9UHW6 222 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 C1QTNF3-AMACRE9PGA6 284 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 CHRNA3P32297 505 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 EIF3BP55884 814 aaKnown RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 PITRM1Q5JRX3 1037 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 ERAP2Q6P179 960 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 C12orf40Q86WS4 652 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 PHF13Q86YI8 300 aaPredicted RBP7.35□□□□□ -1.23
MSH6-209ENST00000538136 GATAD2AQ86YP4 633 aa7.35□□□□□ -1.23
MSH6-209ENST00000538136 CDKL3Q8IVW4 592 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms