RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 RP9Q8TA86 221 aaKnown RBP14.53□□□□□ -0.08
USP44-203ENST00000537435 MYLPFQ96A32 169 aa14.53□□□□□ -0.08
USP44-203ENST00000537435 CATSPER2Q96P56 530 aa14.53□□□□□ -0.08
USP44-203ENST00000537435 TSGA13Q96PP4 275 aa14.53□□□□□ -0.08
USP44-203ENST00000537435 SIK2Q9H0K1 926 aa14.53□□□□□ -0.08
USP44-203ENST00000537435 TARM1B6A8C7 271 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 DLX3O60479 287 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 VAPBO95292 243 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 JUNP05412 331 aaKnown RBP14.52□□□□□ -0.08
USP44-203ENST00000537435 VCLP18206 1134 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 PPARGP37231 505 aaPredicted RBP14.52□□□□□ -0.08
USP44-203ENST00000537435 POLE2P56282 527 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 DLG1Q12959 904 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 CYLC2Q14093 348 aaPredicted RBP14.52□□□□□ -0.08
USP44-203ENST00000537435 GRAMD1BQ3KR37 738 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 TMEM198Q66K66 360 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 NXNQ6DKJ4 435 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 ESRP1Q6NXG1 681 aaKnown RBP14.52□□□□□ -0.08
USP44-203ENST00000537435 KLHDC8BQ8IXV7 354 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 LSMEM2Q8N112 164 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 SPATA6LQ8N4H0 392 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 DQX1Q8TE96 717 aaKnown RBP14.52□□□□□ -0.08
USP44-203ENST00000537435 LPPQ93052 612 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 SERPINI1Q99574 410 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 FTHL17Q9BXU8 183 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 UNKQ9C0B0 810 aaKnown RBP14.52□□□□□ -0.08
USP44-203ENST00000537435 CDYLQ9Y232 598 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 ACOT9Q9Y305 439 aa14.52□□□□□ -0.08
USP44-203ENST00000537435 TRIP12Q14669 1992 aaPredicted RBP14.52□□□□□ -0.09
USP44-203ENST00000537435 CASTOR2A6NHX0 329 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 PGK1P00558 417 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 ZNF865P0CJ78 1059 aaPredicted RBP14.52□□□□□ -0.09
USP44-203ENST00000537435 RAB10P61026 200 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 NSUN2Q08J23 767 aaKnown RBP eCLIP14.52□□□□□ -0.09
USP44-203ENST00000537435 PDCD2Q16342 344 aaPredicted RBP14.52□□□□□ -0.09
USP44-203ENST00000537435 UGP2Q16851 508 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 LCA5Q86VQ0 697 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 CEP97Q8IW35 865 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 MFSD6LQ8IWD5 586 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 CNTN4Q8IWV2 1026 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 GALNT15Q8N3T1 639 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 ATPAF2Q8N5M1 289 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 CPSF7Q8N684 471 aaKnown RBP14.52□□□□□ -0.09
USP44-203ENST00000537435 NXNL1Q96CM4 212 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 RCN3Q96D15 328 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 ZNF419Q96HQ0 510 aaPredicted RBP14.52□□□□□ -0.09
USP44-203ENST00000537435 CDRT15Q96T59 188 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 FICDQ9BVA6 458 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 ZNF385DQ9H6B1 395 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 CSNK1G1Q9HCP0 422 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 FAM105AQ9NUU6 356 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 FLRT1Q9NZU1 646 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 VTI1BQ9UEU0 232 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 SHROOM3Q8TF72 1996 aa14.52□□□□□ -0.09
USP44-203ENST00000537435 FAM95CA0A1B0GW59 222 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 SLCO1B7G3V0H7 640 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 COL6A2P12110 1019 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 BDNFP23560 247 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 CCNCP24863 283 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 THOP1P52888 689 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 ZNF33AQ06730 810 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 MMEL1Q495T6 779 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 BNC2Q6ZN30 1099 aaPredicted RBP14.51□□□□□ -0.09
USP44-203ENST00000537435 EP400NLQ6ZTU2 488 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 SDCCAG8Q86SQ7 713 aaPredicted RBP14.51□□□□□ -0.09
USP44-203ENST00000537435 ARHGAP12Q8IWW6 846 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 MARK4Q96L34 752 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 FCRL5Q96RD9 977 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 PARK7Q99497 189 aaKnown RBP14.51□□□□□ -0.09
USP44-203ENST00000537435 OMDQ99983 421 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 PAAF1Q9BRP4 392 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 CCDC28BQ9BUN5 200 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 OSBPL2Q9H1P3 480 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 PSMD13Q9UNM6 376 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 NEU3Q9UQ49 428 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 INPP5FQ9Y2H2 1132 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 TXNDC9O14530 226 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 STMN1P16949 149 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 ARNTP27540 789 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 PCSK1P29120 753 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 CPT1AP50416 773 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 TIGD5Q53EQ6 642 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 OGFRL1Q5TC84 451 aaPredicted RBP14.51□□□□□ -0.09
USP44-203ENST00000537435 MAP3K21Q5TCX8 1036 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 DENND5AQ6IQ26 1287 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 SETD3Q86TU7 594 aaPredicted RBP14.51□□□□□ -0.09
USP44-203ENST00000537435 ST13P4Q8IZP2 240 aaPredicted RBP14.51□□□□□ -0.09
USP44-203ENST00000537435 PQLC1Q8N2U9 271 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 CCNYL1Q8N7R7 359 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 PPHLN1Q8NEY8 458 aaKnown RBP14.51□□□□□ -0.09
USP44-203ENST00000537435 IRGQQ8WZA9 623 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 GPR78Q96P69 363 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 GLOD4Q9HC38 313 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 SLC2A6Q9UGQ3 507 aa14.51□□□□□ -0.09
USP44-203ENST00000537435 MRPL42Q9Y6G3 142 aaKnown RBP14.51□□□□□ -0.09
USP44-203ENST00000537435 SLC22A2O15244 555 aa14.5□□□□□ -0.09
USP44-203ENST00000537435 CFLARO15519 480 aa14.5□□□□□ -0.09
USP44-203ENST00000537435 PEX1O43933 1283 aa14.5□□□□□ -0.09
USP44-203ENST00000537435 ANXA9O76027 345 aa14.5□□□□□ -0.09
USP44-203ENST00000537435 ENO3P13929 434 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms