RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 ETFBP38117 255 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CCR5P51681 352 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SLC14A1Q13336 389 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 KIF19Q2TAC6 998 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 DPY19L3Q6ZPD9 716 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RTL3Q8N8U3 475 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TMIEQ8NEW7 156 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 FNIP1Q8TF40 1166 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SLC6A18Q96N87 628 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CEP44Q9C0F1 390 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 MAGEH1Q9H213 219 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 KDM4CQ9H3R0 1056 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 NOL6Q9H6R4 1146 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 GAREM1Q9H706 876 aa18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 FCF1Q9Y324 198 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 FARP1Q9Y4F1 1045 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TDRD6O60522 2096 aaKnown RBP18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ARID1BQ8NFD5 2236 aaPredicted RBP18.22■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3DA0A087WVF3 549 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3IA0A087WXS9 549 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3EA0A087X179 549 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3KA0A087X1G2 549 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3FA6NER0 549 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3LB9A6J9 549 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ARHGAP6O43182 974 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 LATO43561 262 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CREB3O43889 395 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RAMP2O60895 175 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 CER1O95813 267 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3HP0C7X1 549 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 MAGEA1P43355 309 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TAS2R38P59533 333 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 RACK1P63244 317 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TEAD4Q15561 434 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 HLA-BQ31612 363 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 KCNT1Q5JUK3 1230 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PIP5KL1Q5T9C9 394 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3GQ6DHY5 549 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3CQ6IPX1 549 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 IL27RAQ6UWB1 636 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 TBC1D3Q8IZP1 549 aaPredicted RBP18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 PCDH20Q8N6Y1 951 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ARRDC3Q96B67 414 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 GPATCH2LQ9NWQ4 482 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 INTUQ9ULD6 942 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 ANKRD6Q9Y2G4 727 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 FNDC3AQ9Y2H6 1198 aaKnown RBP18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 SNX11Q9Y5W9 270 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 WASF2Q9Y6W5 498 aa18.21■□□□□ 0.51
TNFRSF1A-209ENST00000536717 MAP1BP46821 2468 aaKnown RBP18.21■□□□□ 0.5
TNFRSF1A-209ENST00000536717 WASH4PA8MWX3 477 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 KPNA3O00505 521 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 WNT9AO14904 365 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PRNPP04156 253 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 TMEM253P0C7T8 217 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 DESP17661 470 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 POLD3Q15054 466 aaPredicted RBP18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 GRIN3AQ8TCU5 1115 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PEBP4Q96S96 227 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 EPAS1Q99814 870 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PACSIN1Q9BY11 444 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SLC32A1Q9H598 525 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 IL36AQ9UHA7 158 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PCDHA13Q9Y5I0 950 aa18.2■□□□□ 0.5
TNFRSF1A-209ENST00000536717 LEFTY1O75610 366 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 WNT1P04628 370 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CYP1A2P05177 515 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ZNF883P0CG24 379 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 RECQLP46063 649 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 FAM193AP78312 1265 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CA9Q16790 459 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ARSIQ5FYB1 569 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CYP4V2Q6ZWL3 525 aaPredicted RBP18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ISG20Q96AZ6 181 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 TM6SF2Q9BZW4 377 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CEP295Q9C0D2 2601 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 TM7SF3Q9NS93 570 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 TPX2Q9ULW0 747 aaKnown RBP18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 AP4E1Q9UPM8 1137 aa18.19■□□□□ 0.5
TNFRSF1A-209ENST00000536717 KDELR3O43731 214 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SH3BP5O60239 455 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CTSKP43235 329 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CCNHP51946 323 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CCZ1BP86790 482 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CCZ1P86791 482 aaPredicted RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CARD16Q5EG05 197 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 ADAT2Q7Z6V5 191 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 TRIM69Q86WT6 500 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 TXLNBQ8N3L3 684 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 VOPP1Q96AW1 172 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CAMK1GQ96NX5 476 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 HEPHQ9BQS7 1158 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SNRNP25Q9BV90 132 aaKnown RBP18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 NUP85Q9BW27 656 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 KLC2Q9H0B6 622 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 CATSPERBQ9H7T0 1116 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 PCSK1NQ9UHG2 260 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 HPCAL4Q9UM19 191 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 SHROOM3Q8TF72 1996 aa18.18■□□□□ 0.5
TNFRSF1A-209ENST00000536717 LRRK1Q38SD2 2015 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms