RNA–Protein interactions for RNA: ENST00000535717.1

CHD4-203, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-203ENST00000535717 RHOAP61586 193 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 SRSF5Q13243 272 aaKnown RBP12.26□□□□□ -0.45
CHD4-203ENST00000535717 RFTN1Q14699 578 aaPredicted RBP12.26□□□□□ -0.45
CHD4-203ENST00000535717 LBRQ14739 615 aaKnown RBP12.26□□□□□ -0.45
CHD4-203ENST00000535717 CST6Q15828 149 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 ZNF569Q5MCW4 686 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 TMCO4Q5TGY1 634 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 TSEN2Q8NCE0 465 aaKnown RBP12.26□□□□□ -0.45
CHD4-203ENST00000535717 OR2AP1Q8NGE2 309 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 OR6K2Q8NGY2 324 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 RLN3Q8WXF3 142 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 VOPP1Q96AW1 172 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 HDAC11Q96DB2 347 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 CCDC114Q96M63 670 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 LGMNQ99538 433 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 ITM2CQ9NQX7 267 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 HECAQ9UBI9 543 aaPredicted RBP12.26□□□□□ -0.45
CHD4-203ENST00000535717 SARDHQ9UL12 918 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 PPM1HQ9ULR3 514 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 INVSQ9Y283 1065 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 FARP1Q9Y4F1 1045 aaPredicted RBP12.26□□□□□ -0.45
CHD4-203ENST00000535717 R4GN57 208 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 EML5Q05BV3 1969 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 DMDP11532 3685 aa12.26□□□□□ -0.45
CHD4-203ENST00000535717 SHROOM3Q8TF72 1996 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 GOLGA6L9A6NEM1 432 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 MUSKO15146 869 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 MATN3O15232 486 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 MID1O15344 667 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 HRO43593 1189 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 KIF5CO60282 957 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 LILRB5O75023 590 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 IL1BP01584 269 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 GKP32189 559 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 SLC8A1P32418 973 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 P2RY2P41231 377 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 RGRP47804 291 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 TPMTP51580 245 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 METAP1P53582 386 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 SNRPD1P62314 119 aaKnown RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 ZBTB16Q05516 673 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 PPIDQ08752 370 aaKnown RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 PDK1Q15118 436 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 MYLK3Q32MK0 819 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 MAP7D1Q3KQU3 841 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 USP39Q53GS9 565 aaKnown RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 B4GALNT4Q76KP1 1039 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 DSG4Q86SJ6 1040 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 SLC35F6Q8N357 371 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 RYBPQ8N488 228 aaPredicted RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 FAM160A2Q8N612 972 aaPredicted RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 FRMD1Q8N878 549 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 CCNYQ8ND76 341 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 MAML1Q92585 1016 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 P3H4Q92791 437 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 ATOH1Q92858 354 aaPredicted RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 FATE1Q969F0 183 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 HAUS1Q96CS2 278 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 ZNF419Q96HQ0 510 aaPredicted RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 EXOC2Q96KP1 924 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 GDAP1L1Q96MZ0 367 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 PSKH2Q96QS6 385 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 HEPHQ9BQS7 1158 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 CINPQ9BW66 212 aaPredicted RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 IRF2BPLQ9H1B7 796 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 PABPC3Q9H361 631 aaKnown RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 USP36Q9P275 1121 aaKnown RBP12.25□□□□□ -0.45
CHD4-203ENST00000535717 SEPT3Q9UH03 358 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 IL36AQ9UHA7 158 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 CYP8B1Q9UNU6 501 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 WASF2Q9Y6W5 498 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 FANCMQ8IYD8 2048 aa12.25□□□□□ -0.45
CHD4-203ENST00000535717 MYO15AQ9UKN7 3530 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 TCRBV7S2A1N4TA0A589 114 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 ESPNB1AK53 854 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 APOC4-APOC2K7ER74 178 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 KRIT1O00522 736 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 KCNK3O14649 394 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 ENC1O14682 589 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 PPP1R12AO14974 1030 aaPredicted RBP12.24□□□□□ -0.45
CHD4-203ENST00000535717 INSIG1O15503 277 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 ZNF217O75362 1048 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 LEFTY1O75610 366 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 GJB3O75712 270 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 RPP40O75818 363 aaKnown RBP12.24□□□□□ -0.45
CHD4-203ENST00000535717 TJP3O95049 919 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 POP4O95707 220 aaKnown RBP12.24□□□□□ -0.45
CHD4-203ENST00000535717 IGSF6O95976 241 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 ADH1BP00325 375 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 IGLV3-19P01714 112 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 APOC2P02655 101 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 DNTTP04053 509 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 ACADMP11310 421 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 C5AR1P21730 350 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 CNR2P34972 360 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 MMP13P45452 471 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 AP1B1Q10567 949 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 KLF1Q13351 362 aaPredicted RBP12.24□□□□□ -0.45
CHD4-203ENST00000535717 ZNF235Q14590 738 aa12.24□□□□□ -0.45
CHD4-203ENST00000535717 POM121L1PQ3SYA9 428 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms