RNA–Protein interactions for RNA: ENST00000535527.5

CHFR-210, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 746 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-210ENST00000535527 WDR5BQ86VZ2 330 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 C17orf53Q8N3J3 647 aaPredicted RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 PGBD5Q8N414 524 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 C12orf50Q8NA57 414 aaPredicted RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 KDM1BQ8NB78 822 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 KCTD6Q8NC69 237 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 OR6K2Q8NGY2 324 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 EXOC2Q96KP1 924 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 C2orf49Q9BVC5 232 aaPredicted RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 TM6SF2Q9BZW4 377 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 LUC7LQ9NQ29 371 aaKnown RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 DTLQ9NZJ0 730 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 SAE1Q9UBE0 346 aaPredicted RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 LCMT1Q9UIC8 334 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 PCDHA3Q9Y5H8 950 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.35□□□□□ -0.27
CHFR-210ENST00000535527 WASF2Q9Y6W5 498 aa13.35□□□□□ -0.27
CHFR-210ENST00000535527 ANKRD11Q6UB99 2663 aaPredicted RBP13.35□□□□□ -0.27
CHFR-210ENST00000535527 SPEGQ15772 3267 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 TMEM131Q92545 1883 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 TCRBV7S2A1N4TA0A589 114 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 TTC24A2A3L6 582 aaPredicted RBP13.34□□□□□ -0.27
CHFR-210ENST00000535527 AXIN1O15169 862 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 INSIG1O15503 277 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 DAPK3O43293 454 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 MAFKO60675 156 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 ZNF806P0C7X5 589 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 PYGMP11217 842 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 DRD3P35462 400 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 DNA2P51530 1060 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 DYNLT1P63172 113 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 GALNT2Q10471 571 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 POM121L1PQ3SYA9 428 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 DPY19L3Q6ZPD9 716 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 TRMT11Q7Z4G4 463 aaKnown RBP13.34□□□□□ -0.27
CHFR-210ENST00000535527 CCDC117Q8IWD4 279 aaPredicted RBP13.34□□□□□ -0.27
CHFR-210ENST00000535527 AADATQ8N5Z0 425 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 KDF1Q8NAX2 398 aaPredicted RBP13.34□□□□□ -0.27
CHFR-210ENST00000535527 ATP11CQ8NB49 1132 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 OR2T3Q8NH03 318 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 KIAA1524Q8TCG1 905 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 HES6Q96HZ4 224 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 OLFM3Q96PB7 478 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 RSPH9Q9H1X1 276 aaPredicted RBP13.34□□□□□ -0.27
CHFR-210ENST00000535527 RETREG1Q9H6L5 497 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 USP36Q9P275 1121 aaKnown RBP13.34□□□□□ -0.27
CHFR-210ENST00000535527 SLC25A13Q9UJS0 675 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 PLA2G4CQ9UP65 541 aa13.34□□□□□ -0.27
CHFR-210ENST00000535527 PCDH15Q96QU1 1955 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 IGHV1OR15-9A0A0B4J2B8 117 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 ZNF487B1APH4 448 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 C10orf142B7Z368 130 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 NPC1O15118 1278 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 P2RY2P41231 377 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 ZNF135P52742 658 aaPredicted RBP13.33□□□□□ -0.28
CHFR-210ENST00000535527 NAP1L1P55209 391 aaKnown RBP13.33□□□□□ -0.28
CHFR-210ENST00000535527 SULT2A1Q06520 285 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 SLC10A7Q0GE19 358 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 KIAA1324Q6UXG2 1013 aaKnown RBP13.33□□□□□ -0.28
CHFR-210ENST00000535527 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 CEP68Q76N32 757 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 TMPRSS6Q8IU80 811 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 CAMKK1Q8N5S9 505 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 ARRDC3Q96B67 414 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 HAUS1Q96CS2 278 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 TRMT1Q9NXH9 659 aaKnown RBP13.33□□□□□ -0.28
CHFR-210ENST00000535527 IPO11Q9UI26 975 aaKnown RBP13.33□□□□□ -0.28
CHFR-210ENST00000535527 ZMIZ1Q9ULJ6 1067 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.28
CHFR-210ENST00000535527 FASNP49327 2511 aaKnown RBP13.33□□□□□ -0.28
CHFR-210ENST00000535527 GON4LQ3T8J9 2241 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 TMEM8BA6NDV4 472 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 MID1O15344 667 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 SPINT1O43278 529 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 BNIP3LO60238 219 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 KCNK5O95279 499 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 PTMAP06454 111 aaKnown RBP13.32□□□□□ -0.28
CHFR-210ENST00000535527 ETFBP38117 255 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 PSMD8P48556 350 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 CCNHP51946 323 aaPredicted RBP13.32□□□□□ -0.28
CHFR-210ENST00000535527 CCDC173Q0VFZ6 552 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 KCTD19Q17RG1 926 aaPredicted RBP13.32□□□□□ -0.28
CHFR-210ENST00000535527 STPG1Q5TH74 334 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 MEI1Q5TIA1 1274 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 KAZNQ674X7 775 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 UNQ6494/PRO21346Q6UXR6 183 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 PEX26Q7Z412 305 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 ZSWIM9Q86XI8 627 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 VSIG1Q86XK7 387 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 RFX6Q8HWS3 928 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 MMAAQ8IVH4 418 aaKnown RBP13.32□□□□□ -0.28
CHFR-210ENST00000535527 TSEN2Q8NCE0 465 aaKnown RBP13.32□□□□□ -0.28
CHFR-210ENST00000535527 EXD1Q8NHP7 514 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 GRIN3AQ8TCU5 1115 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 FAM131CQ96AQ9 280 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 LGMNQ99538 433 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 HEMGNQ9BXL5 484 aa13.32□□□□□ -0.28
CHFR-210ENST00000535527 TLR10Q9BXR5 811 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms