RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 HAUS1Q96CS2 278 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 HDAC11Q96DB2 347 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 HMCESQ96FZ2 354 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 RUNDC3BQ96NL0 473 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 AP1M1Q9BXS5 423 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 DEC1Q9P2X7 70 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 DRG1Q9Y295 367 aaKnown RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 MYOFQ9NZM1 2061 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 CHD5Q8TDI0 1954 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 A0A0D9SEW6 157 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 MCF2LO15068 1137 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 WFS1O76024 890 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 GLULP15104 373 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 CCND1P24385 295 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 MZF1P28698 734 aaPredicted RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 CD70P32970 193 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 ACVRL1P37023 503 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 OPRD1P41143 372 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 CSKP41240 450 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 DGKGP49619 791 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 EIF3EP60228 445 aaKnown RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 TRADDQ15628 312 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 OASLQ15646 514 aaKnown RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 C11orf91Q3C1V1 193 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 DENND2CQ68D51 928 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 TAOK1Q7L7X3 1001 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 TRPM8Q7Z2W7 1104 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 C12orf40Q86WS4 652 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 NAT16Q8N8M0 369 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 OR7D4Q8NG98 312 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 OR2W6PQ8NHA6 318 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 WFIKKN2Q8TEU8 576 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 C1orf54Q8WWF1 131 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 CHFRQ96EP1 664 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 MSANTD3Q96H12 275 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 NEUROG2Q9H2A3 272 aa12.53□□□□□ -0.4
SCARB1-204ENST00000535005 C8orf33Q9H7E9 229 aaPredicted RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 DNAJC17Q9NVM6 304 aaKnown RBP12.53□□□□□ -0.4
SCARB1-204ENST00000535005 COL6A3P12111 3177 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 BCLAF3A2AJT9 711 aaKnown RBP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 KDELR3O43731 214 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 MAFKO60675 156 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 PHF2O75151 1096 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 RBP3P10745 1247 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 CCNCP24863 283 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 SLC6A11P48066 632 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 CCNG1P51959 295 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 IL10RBQ08334 325 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 PPIDQ08752 370 aaKnown RBP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 PRKD1Q15139 912 aaPredicted RBP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 SPRED3Q2MJR0 410 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 PLEKHG6Q3KR16 790 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 SLC45A4Q5BKX6 768 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 GRAMD4Q6IC98 578 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 CDKL3Q8IVW4 592 aaPredicted RBP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 PHTF2Q8N3S3 785 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 DCAF4L2Q8NA75 395 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 TFB1MQ8WVM0 346 aaKnown RBP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 ATG4AQ8WYN0 398 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 ACDQ96AP0 544 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 QKIQ96PU8 341 aaKnown RBP eCLIP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 MUC3BQ9H195 1237 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 ABCB8Q9NUT2 735 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 IPO11Q9UI26 975 aaKnown RBP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 INTS6Q9UL03 887 aaKnown RBP12.52□□□□□ -0.41
SCARB1-204ENST00000535005 DNPEPQ9ULA0 475 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 DUSP12Q9UNI6 340 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 UNC80Q8N2C7 3258 aa12.52□□□□□ -0.41
SCARB1-204ENST00000535005 NUP205Q92621 2012 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 MYO10Q9HD67 2058 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 COL4A3Q01955 1670 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 A0A0A0MRY4 1105 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 DFFAO00273 331 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 NARSO43776 548 aaKnown RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 PRAMEF11O60813 436 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ZMPSTE24O75844 475 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 MAP3K6O95382 1288 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ITGAVP06756 1048 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 CHRNA3P32297 505 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 COILP38432 576 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 SKIV2L2P42285 1042 aaKnown RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 NAA25Q14CX7 972 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 PITRM1Q5JRX3 1037 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 DUPD1Q68J44 220 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 IL31Q6EBC2 164 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 RALGPS2Q86X27 583 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 AHI1Q8N157 1196 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ATPAF2Q8N5M1 289 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 NETO2Q8NC67 525 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 TTC8Q8TAM2 541 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 TTC17Q96AE7 1141 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ZNF599Q96NL3 588 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 FAM118BQ9BPY3 351 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ERP44Q9BS26 406 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 SPON2Q9BUD6 331 aa12.51□□□□□ -0.41
SCARB1-204ENST00000535005 C2orf49Q9BVC5 232 aaPredicted RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 DDX47Q9H0S4 455 aaKnown RBP12.51□□□□□ -0.41
SCARB1-204ENST00000535005 ATP13A1Q9HD20 1204 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms