RNA–Protein interactions for RNA: ENST00000533943.1

MRPL49-208, Transcript of mitochondrial ribosomal protein L49, humanhuman

TSL 3

Gene MRPL49, Length 688 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL49-208ENST00000533943 PRPF39Q86UA1 669 aaKnown RBP16.42■□□□□ 0.22
MRPL49-208ENST00000533943 TRIM69Q86WT6 500 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 CASKIN2Q8WXE0 1202 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 ARRDC3Q96B67 414 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 HMCESQ96FZ2 354 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 PPP1R16AQ96I34 528 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 SLC6A18Q96N87 628 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 PEBP4Q96S96 227 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 SNRNP25Q9BV90 132 aaKnown RBP16.42■□□□□ 0.22
MRPL49-208ENST00000533943 HDAC8Q9BY41 377 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 DHX35Q9H5Z1 703 aaKnown RBP16.42■□□□□ 0.22
MRPL49-208ENST00000533943 PREBQ9HCU5 417 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 ARHGAP20Q9P2F6 1191 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 HECAQ9UBI9 543 aaPredicted RBP16.42■□□□□ 0.22
MRPL49-208ENST00000533943 SNX11Q9Y5W9 270 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 ACTL7AQ9Y615 435 aa16.42■□□□□ 0.22
MRPL49-208ENST00000533943 ASCC3Q8N3C0 2202 aaKnown RBP16.42■□□□□ 0.22
MRPL49-208ENST00000533943 RNF103O00237 685 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 EEF2KO00418 725 aaKnown RBP16.41■□□□□ 0.22
MRPL49-208ENST00000533943 BUB1O43683 1085 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 GSRP00390 522 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 CYP1A2P05177 515 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 CTSKP43235 329 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 SERINC3Q13530 473 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 HNRNPDQ14103 355 aaKnown RBP16.41■□□□□ 0.22
MRPL49-208ENST00000533943 NFKBIBQ15653 356 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 ERN2Q76MJ5 926 aaKnown RBP16.41■□□□□ 0.22
MRPL49-208ENST00000533943 ADAT2Q7Z6V5 191 aaKnown RBP16.41■□□□□ 0.22
MRPL49-208ENST00000533943 GRIN3AQ8TCU5 1115 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 SKA1Q96BD8 255 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 LRIG1Q96JA1 1093 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 TM6SF2Q9BZW4 377 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 THAP2Q9H0W7 228 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 IL21RQ9HBE5 538 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 DMTF1Q9Y222 760 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 PCDHGB2Q9Y5G2 931 aa16.41■□□□□ 0.22
MRPL49-208ENST00000533943 A0A1W2PR77 199 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 ITGB7P26010 798 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 PMLP29590 882 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 HCAR3P49019 387 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 NDST2P52849 883 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 C21orf59P57076 290 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 SNRPD1P62314 119 aaKnown RBP16.4■□□□□ 0.22
MRPL49-208ENST00000533943 PIGHQ14442 188 aaPredicted RBP16.4■□□□□ 0.22
MRPL49-208ENST00000533943 BOLA3Q53S33 107 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 KCNT1Q5JUK3 1230 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 CCDC122Q5T0U0 273 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 NAPEPLDQ6IQ20 393 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 LAYNQ6UX15 382 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 ZNF354CQ86Y25 554 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 NIPA2Q8N8Q9 360 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 RNF214Q8ND24 703 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 OR2AP1Q8NGE2 309 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 OR8K1Q8NGG5 319 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 SERAC1Q96JX3 654 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 KCTD15Q96SI1 283 aaPredicted RBP16.4■□□□□ 0.22
MRPL49-208ENST00000533943 DNAJC7Q99615 494 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 KLC2Q9H0B6 622 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 LRRC19Q9H756 370 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 AASDHPPTQ9NRN7 309 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 TM7SF3Q9NS93 570 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 NENFQ9UMX5 172 aa16.4■□□□□ 0.22
MRPL49-208ENST00000533943 FNDC3AQ9Y2H6 1198 aaKnown RBP16.4■□□□□ 0.22
MRPL49-208ENST00000533943 SH3BP5O60239 455 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 TMCC1O94876 653 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 POP4O95707 220 aaKnown RBP16.39■□□□□ 0.21
MRPL49-208ENST00000533943 WNT1P04628 370 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 CD38P28907 300 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 EIF4A3P38919 411 aaKnown RBP16.39■□□□□ 0.21
MRPL49-208ENST00000533943 ZNF423Q2M1K9 1284 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 MYLK3Q32MK0 819 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 SETMARQ53H47 684 aaPredicted RBP16.39■□□□□ 0.21
MRPL49-208ENST00000533943 SLC45A4Q5BKX6 768 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 LEKR1Q6ZMV7 388 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 DBX2Q6ZNG2 339 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 RFX8Q6ZV50 586 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 VSTM4Q8IW00 320 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 RYBPQ8N488 228 aaPredicted RBP16.39■□□□□ 0.21
MRPL49-208ENST00000533943 NUP85Q9BW27 656 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 ZDHHC6Q9H6R6 413 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 IP6K2Q9UHH9 426 aa16.39■□□□□ 0.21
MRPL49-208ENST00000533943 NYNRINQ9P2P1 1898 aaKnown RBP16.38■□□□□ 0.21
MRPL49-208ENST00000533943 A0A1W2PQU0 124 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 WNT9AO14904 365 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 DAPK3O43293 454 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 DFNA5O60443 496 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 RNGTTO60942 597 aaKnown RBP16.38■□□□□ 0.21
MRPL49-208ENST00000533943 ERCC2P18074 760 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 IL1R2P27930 398 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 MAT2AP31153 395 aaKnown RBP16.38■□□□□ 0.21
MRPL49-208ENST00000533943 NEK3P51956 506 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 SHC2P98077 582 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 SUZ12Q15022 739 aaKnown RBP16.38■□□□□ 0.21
MRPL49-208ENST00000533943 DPYSL2Q16555 572 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
MRPL49-208ENST00000533943 AFMIDQ63HM1 303 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 HORMAD1Q86X24 394 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 NAXDQ8IW45 347 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 MFSD2AQ8NA29 543 aa16.38■□□□□ 0.21
MRPL49-208ENST00000533943 VOPP1Q96AW1 172 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms