RNA–Protein interactions for RNA: ENST00000533909.5

CAPN1-227, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-227ENST00000533909 EIF2B4Q9UI10 523 aaKnown RBP13.63□□□□□ -0.23
CAPN1-227ENST00000533909 SARDHQ9UL12 918 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 INTUQ9ULD6 942 aa13.63□□□□□ -0.23
CAPN1-227ENST00000533909 A0A1B0GTW7 788 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 LNP1A1A4G5 178 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 KRIT1O00522 736 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 GDF9O60383 454 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 LEFTY1O75610 366 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 TMCC1O94876 653 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 IGSF6O95976 241 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 GSRP00390 522 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 SYPP08247 313 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 SERPINF2P08697 491 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 MAN1A1P33908 653 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 SERPINB6P35237 376 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 ARHGAP25P42331 645 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 MAPK8P45983 427 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 PAPOLAP51003 745 aaKnown RBP13.62□□□□□ -0.23
CAPN1-227ENST00000533909 ADPRHP54922 357 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 IRX4P78413 519 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 SLC25A11Q02978 314 aaKnown RBP13.62□□□□□ -0.23
CAPN1-227ENST00000533909 CNTN1Q12860 1018 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 PUM1Q14671 1186 aaKnown RBP eCLIP13.62□□□□□ -0.23
CAPN1-227ENST00000533909 TEAD4Q15561 434 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 INO80DQ53TQ3 878 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-227ENST00000533909 KIAA0895LQ68EN5 471 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 SLC23A3Q6PIS1 610 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 CYP4V2Q6ZWL3 525 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-227ENST00000533909 POLNQ7Z5Q5 900 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 TMTC1Q8IUR5 882 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 PAF1Q8N7H5 531 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 CHST14Q8NCH0 376 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 OR2AP1Q8NGE2 309 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 CSPG4P5Q96PW8 444 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 NOL6Q9H6R4 1146 aaKnown RBP13.62□□□□□ -0.23
CAPN1-227ENST00000533909 PCDH18Q9HCL0 1135 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 OSGEPQ9NPF4 335 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 TMEM9BQ9NQ34 198 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 TPX2Q9ULW0 747 aaKnown RBP13.62□□□□□ -0.23
CAPN1-227ENST00000533909 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.62□□□□□ -0.23
CAPN1-227ENST00000533909 ACTL7AQ9Y615 435 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 CEP192Q8TEP8 1941 aa13.62□□□□□ -0.23
CAPN1-227ENST00000533909 NUMA1Q14980 2115 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 PLK4O00444 970 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 BCAT2O15382 392 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-227ENST00000533909 POP4O95707 220 aaKnown RBP13.61□□□□□ -0.23
CAPN1-227ENST00000533909 KCNA4P22459 653 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 AMPD1P23109 780 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 CD27P26842 260 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 AFF3P51826 1226 aaKnown RBP13.61□□□□□ -0.23
CAPN1-227ENST00000533909 DPYSQ14117 519 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 STPG1Q5TH74 334 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 PEAR1Q5VY43 1037 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-227ENST00000533909 FBXL19Q6PCT2 694 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 ADAT2Q7Z6V5 191 aaKnown RBP13.61□□□□□ -0.23
CAPN1-227ENST00000533909 SPC24Q8NBT2 197 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 OR6K2Q8NGY2 324 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 NSMCE1Q8WV22 266 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 DNASE2BQ8WZ79 361 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 BIRC7Q96CA5 298 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 RMDN1Q96DB5 314 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 SLC39A8Q9C0K1 460 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 LRRC19Q9H756 370 aa13.61□□□□□ -0.23
CAPN1-227ENST00000533909 RCOR3Q9P2K3 495 aaPredicted RBP13.61□□□□□ -0.23
CAPN1-227ENST00000533909 SPOPO43791 374 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 PRAMEF11O60813 436 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 PALMO75781 387 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 CTSLP07711 333 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 TNNT1P13805 278 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 ENGP17813 658 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 CDC25BP30305 580 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 DRD3P35462 400 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 CCR5P51681 352 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 METAP1P53582 386 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 PDK2Q15119 407 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 MYLK3Q32MK0 819 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 UAP1L1Q3KQV9 507 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 CFAP58Q5T655 872 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 ATXN7L2Q5T6C5 722 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-227ENST00000533909 TXNRD3NBQ6F5E7 133 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 ERN2Q76MJ5 926 aaKnown RBP13.6□□□□□ -0.23
CAPN1-227ENST00000533909 PLPP6Q8IY26 295 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 ATPAF2Q8N5M1 289 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 SKA1Q96BD8 255 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 LRIG1Q96JA1 1093 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 RTKNQ9BST9 563 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 CINPQ9BW66 212 aaPredicted RBP13.6□□□□□ -0.23
CAPN1-227ENST00000533909 OSBPL1AQ9BXW6 950 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 KLC2Q9H0B6 622 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 KDM4CQ9H3R0 1056 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 RXFP3Q9NSD7 469 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 KLHL11Q9NVR0 708 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 NYNRINQ9P2P1 1898 aaKnown RBP13.6□□□□□ -0.23
CAPN1-227ENST00000533909 IMPACTQ9P2X3 320 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 PCDHA13Q9Y5I0 950 aa13.6□□□□□ -0.23
CAPN1-227ENST00000533909 C4orf47A7E2U8 309 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 J3KR12 359 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 NEMP1O14524 444 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 ARHGAP33O14559 1287 aa13.59□□□□□ -0.23
CAPN1-227ENST00000533909 SLC30A4O14863 429 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms