RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 DPY19L3Q6ZPD9 716 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 CCDC13Q8IYE1 715 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 PGBD3Q8N328 593 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 TTC13Q8NBP0 860 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 TMIEQ8NEW7 156 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 PRCCQ92733 491 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 TRIM44Q96DX7 344 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 LRIG1Q96JA1 1093 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 GDAP1L1Q96MZ0 367 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 PSKH2Q96QS6 385 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 LGMNQ99538 433 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 HEPHQ9BQS7 1158 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 CINPQ9BW66 212 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 IRF2BPLQ9H1B7 796 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 SAE1Q9UBE0 346 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 HECAQ9UBI9 543 aaPredicted RBP16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 LHX3Q9UBR4 397 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 AMACRQ9UHK6 382 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 PPM1HQ9ULR3 514 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 SCML1Q9UN30 329 aa16.72■□□□□ 0.27
PACSIN3-210ENST00000533686 ENC1O14682 589 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 ZNF217O75362 1048 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 POP4O95707 220 aaKnown RBP16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 IGSF6O95976 241 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 CHRNA3P32297 505 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 PXNP49023 591 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 FNTBP49356 437 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 CCNHP51946 323 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 GNG11P61952 73 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 DMWDQ09019 674 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 NOMO1Q15155 1222 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 MYLK3Q32MK0 819 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 FAM46CQ5VWP2 391 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 SLC13A5Q86YT5 568 aaPredicted RBP16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 ZBTB44Q8NCP5 570 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 PRSS33Q8NF86 280 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 ERLEC1Q96DZ1 483 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 PBKQ96KB5 322 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 TM6SF2Q9BZW4 377 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 ITM2CQ9NQX7 267 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 HAUS2Q9NVX0 235 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 PCDHGA2Q9Y5H1 932 aa16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 NYNRINQ9P2P1 1898 aaKnown RBP16.71■□□□□ 0.27
PACSIN3-210ENST00000533686 BNIP3LO60238 219 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 ADH1BP00325 375 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 DNTTP04053 509 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 PRNPP04156 253 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 CCNB1P14635 433 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 CNR2P34972 360 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 MMP13P45452 471 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 IFI35P80217 286 aaPredicted RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 OTUD4Q01804 1114 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 RAD51Q06609 339 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 AP1B1Q10567 949 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 TCF15Q12870 199 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 SFSWAPQ12872 951 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 BYSLQ13895 437 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 ZNF235Q14590 738 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 GRM3Q14832 879 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 PRKD1Q15139 912 aaPredicted RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 CST6Q15828 149 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 HEATR6Q6AI08 1181 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 KIAA1324Q6UXG2 1013 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 MMAAQ8IVH4 418 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 TSEN2Q8NCE0 465 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 CHST14Q8NCH0 376 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 ACTL9Q8TC94 416 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 TFB1MQ8WVM0 346 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 HAUS1Q96CS2 278 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 SLC6A17Q9H1V8 727 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 USP36Q9P275 1121 aaKnown RBP16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 IL36AQ9UHA7 158 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 WASF2Q9Y6W5 498 aa16.7■□□□□ 0.26
PACSIN3-210ENST00000533686 C1QTNF3-AMACRE9PGA6 284 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 MTSS1O43312 755 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 ZNF189O75820 626 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 IL1BP01584 269 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 IGLV3-19P01714 112 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 ATP1A1P05023 1023 aaKnown RBP16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 CTSLP07711 333 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 ACADMP11310 421 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 CR2P20023 1033 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 C5AR1P21730 350 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 SLC8A1P32418 973 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 MAPK8P45983 427 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 PTPN5P54829 565 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 USP39Q53GS9 565 aaKnown RBP16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 SLC45A4Q5BKX6 768 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 RALGPS1Q5JS13 557 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 ATXN7L2Q5T6C5 722 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 PIP4K2CQ8TBX8 421 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 LRRN4Q8WUT4 740 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 MAIP1Q8WWC4 291 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 QKIQ96PU8 341 aaKnown RBP eCLIP16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 IL12RB2Q99665 862 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 MGME1Q9BQP7 344 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 FRMD8P1Q9BZ68 369 aaPredicted RBP16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 CPEB1Q9BZB8 566 aaKnown RBP16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 TPSD1Q9BZJ3 242 aa16.69■□□□□ 0.26
PACSIN3-210ENST00000533686 PABPC3Q9H361 631 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms