RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 LZTFL1Q9NQ48 299 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 DTLQ9NZJ0 730 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 HECAQ9UBI9 543 aaPredicted RBP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 LHX3Q9UBR4 397 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 SERGEFQ9UGK8 458 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 AMFRQ9UKV5 643 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.19□□□□□ -0.46
SSBP3-214ENST00000533209 FRYLO94915 3013 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 EML5Q05BV3 1969 aa12.19□□□□□ -0.46
SSBP3-214ENST00000533209 NUP205Q92621 2012 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 hCG_1818297A0A087WSY0 165 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 A0A1W2PP55 124 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 PRR23AA6NEV1 266 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 DDX3YO15523 660 aaKnown RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 PRNPP04156 253 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 KRT10P13645 584 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 ZFXP17010 805 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 C5AR1P21730 350 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 OXTRP30559 389 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 DRD3P35462 400 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 GARSP41250 739 aaKnown RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 RHOAP61586 193 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 SNRPD1P62314 119 aaKnown RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 RFTN1Q14699 578 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 LLGL1Q15334 1064 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 MYLK3Q32MK0 819 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 TMCO4Q5TGY1 634 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 FAM46CQ5VWP2 391 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 SLC36A4Q6YBV0 504 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 USP30Q70CQ3 517 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 ASCL5Q7RTU5 278 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 FAM124AQ86V42 546 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 ATPAF2Q8N5M1 289 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 FAM131CQ96AQ9 280 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 TOE1Q96GM8 510 aaKnown RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 GDAP1L1Q96MZ0 367 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 TSGA13Q96PP4 275 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 MAK16Q9BXY0 300 aaKnown RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 FBXL12Q9NXK8 326 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 IL36AQ9UHA7 158 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 PACSIN2Q9UNF0 486 aaPredicted RBP12.18□□□□□ -0.46
SSBP3-214ENST00000533209 MYO15AQ9UKN7 3530 aa12.18□□□□□ -0.46
SSBP3-214ENST00000533209 NYNRINQ9P2P1 1898 aaKnown RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 MIF4GDA9UHW6 222 aaKnown RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 C1QTNF3-AMACRE9PGA6 284 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 PLK4O00444 970 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 APOL1O14791 398 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 MUSKO15146 869 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 MAP3K13O43283 966 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 NDUFS2O75306 463 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 LEFTY1O75610 366 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 RHOBTB1O94844 696 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 POP4O95707 220 aaKnown RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 IGSF6O95976 241 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 GKP32189 559 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 ACSL1P33121 698 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 PLA2G5P39877 138 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 RGRP47804 291 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 RWDD2BP57060 319 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 COPS2P61201 443 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 DYNLT1P63172 113 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 RPL6Q02878 288 aaKnown RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 ADCY2Q08462 1091 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 SLC10A7Q0GE19 358 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 CNTN1Q12860 1018 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 SFSWAPQ12872 951 aaKnown RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 TFDP2Q14188 446 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 LBRQ14739 615 aaKnown RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 ELF2Q15723 593 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 PPP2R5EQ16537 467 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 POM121L1PQ3SYA9 428 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 ARSIQ5FYB1 569 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 TFDP3Q5H9I0 405 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 KAZNQ674X7 775 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 LAIR1Q6GTX8 287 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 NPNTQ6UXI9 565 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 LPCAT2Q7L5N7 544 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 CCDC50Q8IVM0 306 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 TMEFF1Q8IYR6 380 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 RYBPQ8N488 228 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 HDDC3Q8N4P3 179 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 TSEN2Q8NCE0 465 aaKnown RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 OR6K2Q8NGY2 324 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 GRIN3AQ8TCU5 1115 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 GANCQ8TET4 914 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 LRRN4Q8WUT4 740 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 ARRDC3Q96B67 414 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 FAM122AQ96E09 287 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 HES6Q96HZ4 224 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 EXOC2Q96KP1 924 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 OMDQ99983 421 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 NEUROG2Q9H2A3 272 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 ZDHHC6Q9H6R6 413 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 EVLQ9UI08 416 aaPredicted RBP12.17□□□□□ -0.46
SSBP3-214ENST00000533209 RAB23Q9ULC3 237 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 FZD4Q9ULV1 537 aa12.17□□□□□ -0.46
SSBP3-214ENST00000533209 NCKAP1Q9Y2A7 1128 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms