RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 BUB1O43683 1085 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 LEFTY1O75610 366 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 H2AFZP0C0S5 128 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 CCR5P51681 352 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 CCNHP51946 323 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-210ENST00000532935 NDST2P52849 883 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 GRIK2Q13002 908 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 SMTNL2Q2TAL5 461 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 UAP1L1Q3KQV9 507 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 H2AFVQ71UI9 128 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 PLPP6Q8IY26 295 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 MINDY1Q8N5J2 469 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 GRIN3AQ8TCU5 1115 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 CTNNBL1Q8WYA6 563 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-210ENST00000532935 ARRDC3Q96B67 414 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 HEPHQ9BQS7 1158 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 ORAI3Q9BRQ5 295 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 TM6SF2Q9BZW4 377 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 ZWILCHQ9H900 591 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 OSGEPQ9NPF4 335 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 DYRK4Q9NR20 520 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 CWC15Q9P013 229 aaKnown RBP15.65■□□□□ 0.1
CPSF1-210ENST00000532935 CTTNBP2NLQ9P2B4 639 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 UVRAGQ9P2Y5 699 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 HECAQ9UBI9 543 aaPredicted RBP15.65■□□□□ 0.1
CPSF1-210ENST00000532935 WASF2Q9Y6W5 498 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 TRPM6Q9BX84 2022 aa15.65■□□□□ 0.1
CPSF1-210ENST00000532935 TBC1D3DA0A087WVF3 549 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3IA0A087WXS9 549 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3EA0A087X179 549 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3KA0A087X1G2 549 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 A0A1W2PPC4 97 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3FA6NER0 549 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3LB9A6J9 549 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 GSRP00390 522 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3HP0C7X1 549 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 RARAP10276 462 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 ERCC2P18074 760 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 DEKP35659 375 aaKnown RBP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 HCAR3P49019 387 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 AFF3P51826 1226 aaKnown RBP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 SLC25A11Q02978 314 aaKnown RBP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 DPYSQ14117 519 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 DPYSL2Q16555 572 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 INO80DQ53TQ3 878 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 PIP5KL1Q5T9C9 394 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3GQ6DHY5 549 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TXNRD3NBQ6F5E7 133 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3CQ6IPX1 549 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TBC1D3Q8IZP1 549 aaPredicted RBP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TEKT4Q8WW24 435 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 CASKIN2Q8WXE0 1202 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 HSPH1Q92598 858 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 CELF6Q96J87 481 aaKnown RBP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 CCDC42Q96M95 316 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 ZDHHC5Q9C0B5 715 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 ZDHHC6Q9H6R6 413 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 EBF2Q9HAK2 575 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TM9SF3Q9HD45 589 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 SPTLC3Q9NUV7 552 aa15.64■□□□□ 0.09
CPSF1-210ENST00000532935 TPX2Q9ULW0 747 aaKnown RBP15.64■□□□□ 0.09
CPSF1-210ENST00000532935 ARHGAP42A6NI28 874 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 PCNX2A6NKB5 2137 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 H3BRJ5 948 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 TMCC1O94876 653 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 TMEM253P0C7T8 217 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 CSNK1EP49674 416 aaKnown RBP15.63■□□□□ 0.09
CPSF1-210ENST00000532935 TAS2R38P59533 333 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 SNRPD1P62314 119 aaKnown RBP15.63■□□□□ 0.09
CPSF1-210ENST00000532935 PPP2CBP62714 309 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 PPP2CAP67775 309 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 BNC1Q01954 994 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 CCDC15Q0P6D6 951 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 ERN2Q76MJ5 926 aaKnown RBP15.63■□□□□ 0.09
CPSF1-210ENST00000532935 RYBPQ8N488 228 aaPredicted RBP15.63■□□□□ 0.09
CPSF1-210ENST00000532935 OR2AP1Q8NGE2 309 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 OR2I1PQ8NGU4 316 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 OR6K2Q8NGY2 324 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 PPP1R16AQ96I34 528 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 HDAC8Q9BY41 377 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 SLC39A8Q9C0K1 460 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 PREBQ9HCU5 417 aa15.63■□□□□ 0.09
CPSF1-210ENST00000532935 CABIN1Q9Y6J0 2220 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 A0A1B0GVT2 93 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 LATO43561 262 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 OPHN1O60890 802 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 PROSCO94903 275 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 ITGB7P26010 798 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 GKP32189 559 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 ARL4AP40617 200 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 SSR1P43307 286 aaKnown RBP15.62■□□□□ 0.09
CPSF1-210ENST00000532935 GRIA4P48058 902 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 PAPOLAP51003 745 aaKnown RBP15.62■□□□□ 0.09
CPSF1-210ENST00000532935 FOXK2Q01167 660 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 TEAD4Q15561 434 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 HADHQ16836 314 aaKnown RBP15.62■□□□□ 0.09
CPSF1-210ENST00000532935 PPM1JQ5JR12 505 aa15.62■□□□□ 0.09
CPSF1-210ENST00000532935 ATXN7L2Q5T6C5 722 aaPredicted RBP15.62■□□□□ 0.09
CPSF1-210ENST00000532935 AFMIDQ63HM1 303 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms