RNA–Protein interactions for RNA: ENST00000532540.5

TGFBR3-209, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 1 (best)

Gene TGFBR3, Length 3,913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-209ENST00000532540 LAYNQ6UX15 382 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM26Q6ZUK4 368 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SCN4BQ8IWT1 228 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 OR8H2Q8N162 312 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM130Q8N3G9 435 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 DBF4BQ8NFT6 615 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 PPTC7Q8NI37 304 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF420Q8TAQ5 688 aaPredicted RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 GIPC2Q8TF65 315 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 RAB2BQ8WUD1 216 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 HDAC2Q92769 488 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 APOL5Q9BWW9 433 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ASPSCR1Q9BZE9 553 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM206Q9H813 350 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 WDR41Q9HAD4 459 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 GOLGA2P5Q9HBQ8 144 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ANKEF1Q9NU02 776 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 WBP1LQ9NX94 342 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TMEM9Q9P0T7 183 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 GJD2Q9UKL4 321 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 BAG5Q9UL15 447 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TBX20Q9UMR3 447 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 DGKBQ9Y6T7 804 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 PNMA8CA0A1B0GUJ8 204 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 LINC00854A0A1B0GVQ3 168 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 GTPBP10A4D1E9 387 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SIGLEC16A6NMB1 481 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 STX7O15400 261 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 GAS2O43903 313 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 TNFRSF21O75509 655 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CLPXO76031 633 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SERPINE1P05121 402 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 NAT2P11245 290 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 COL6A2P12110 1019 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 IL32P24001 234 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SEPHS1P49903 392 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CAP1Q01518 475 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CAPSQ13938 189 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 KIF19Q2TAC6 998 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 MOXD1Q6UVY6 613 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CYP2R1Q6VVX0 501 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CHSY1Q86X52 802 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CCNYL1Q8N7R7 359 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 PCYOX1LQ8NBM8 494 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 APBB2Q92870 758 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 C7orf26Q96N11 449 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 APOL4Q9BPW4 351 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC4A5Q9BY07 1137 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 RHOBTB2Q9BYZ6 727 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 SLC7A5P2Q9GIP4 190 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 C1orf21Q9H246 121 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 C12orf65Q9H3J6 166 aaKnown RBP6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ADAMTS5Q9UNA0 930 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ST3GAL5Q9UNP4 418 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 CDYLQ9Y232 598 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 ERGIC3Q9Y282 383 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 EMSYQ7Z589 1322 aa6.88□□□□□ -1.31
TGFBR3-209ENST00000532540 M0R2N6 131 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 FSCN2O14926 492 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SNAP91O60641 907 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 GLRA3O75311 464 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ZNF865P0CJ78 1059 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 FOSL1P15407 271 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 IGFBP4P22692 258 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 PCSK6P29122 969 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ADSLP30566 484 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 POLR2BP30876 1174 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 TNFSF9P41273 254 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 NME5P56597 212 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SNRNP35Q16560 246 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 FXNQ16595 210 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 COBLL1Q53SF7 1204 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 C2CD6Q53TS8 623 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ARMCX4Q5H9R4 360 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ZBTB41Q5SVQ8 909 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 NEPROQ6NW34 567 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CRTC3Q6UUV7 619 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ARMC8Q8IUR7 673 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 LNX1Q8TBB1 728 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 LRRC15Q8TF66 581 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CHPT1Q8WUD6 406 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 RORBQ92753 470 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 SGF29Q96ES7 293 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 VPS35Q96QK1 796 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CIB1Q99828 191 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 C6orf62Q9GZU0 229 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ILKAPQ9H0C8 392 aaPredicted RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 TOR4AQ9NXH8 423 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 GTSE1Q9NYZ3 720 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 IP6K2Q9UHH9 426 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 WBP11Q9Y2W2 641 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 PCDHB4Q9Y5E5 795 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 NOX1Q9Y5S8 564 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 ST14Q9Y5Y6 855 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CEPT1Q9Y6K0 416 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 DNAH12Q6ZR08 3092 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CASP8AP2Q9UKL3 1982 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CYP3A7-CYP3A51PA0A087WV96 503 aa6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 CCNT2O60583 730 aaKnown RBP6.87□□□□□ -1.31
TGFBR3-209ENST00000532540 FUCA1P04066 466 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms